Multi-layered transcriptional control of cranial neural crest development

被引:3
作者
Candido-Ferreira, Ivan L. [1 ]
Lukoseviciute, Martyna [1 ]
Sauka-Spengler, Tatjana [1 ,2 ]
机构
[1] Univ Oxford, MRC Weatherall Inst Mol Med, Radcliffe Dept Med, Oxford OX3, England
[2] Karolinska Inst, Dept Cell & Mol Biol, SE-17177 Stockholm, Sweden
基金
英国惠康基金;
关键词
Cis -regulatory elements; Enhancers; Enhanceropathies; Neurocristopathies; Transcription; Vertebrate development; GENE REGULATORY NETWORKS; N-CADHERIN SWITCH; CELL-CYCLE; SHADOW ENHANCERS; ANALYSIS REVEALS; ZEBRAFISH FOXD3; SUPER-ENHANCERS; BINDING-SITES; EVOLUTION; EXPRESSION;
D O I
10.1016/j.semcdb.2022.07.010
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The neural crest (NC) is an emblematic population of embryonic stem-like cells with remarkable migratory ability. These distinctive attributes have inspired the curiosity of developmental biologists for over 150 years, however only recently the regulatory mechanisms controlling the complex features of the NC have started to become elucidated at genomic scales. Regulatory control of NC development is achieved through combinatorial transcription factor binding and recruitment of associated transcriptional complexes to distal cis-regulatory el-ements. Together, they regulate when, where and to what extent transcriptional programmes are actively deployed, ultimately shaping ontogenetic processes. Here, we discuss how transcriptional networks control NC ontogeny, with a special emphasis on the molecular mechanisms underlying specification of the cephalic NC. We also cover emerging properties of transcriptional regulation revealed in diverse developmental systems, such as the role of three-dimensional conformation of chromatin, and how they are involved in the regulation of NC ontogeny. Finally, we highlight how advances in deciphering the NC transcriptional network have afforded new insights into the molecular basis of human diseases.
引用
收藏
页码:1 / 14
页数:14
相关论文
共 219 条
[41]   Evolutionary Innovation and Stability in Animal Gene Networks [J].
Davidson, Eric H. ;
Erwin, Douglas H. .
JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION, 2010, 314B (03) :182-186
[42]   How best to identify chromosomal interactions: a comparison of approaches [J].
Davies, James O. J. ;
Oudelaar, A. Marieke ;
Higgs, Douglas R. ;
Hughes, Jim R. .
NATURE METHODS, 2017, 14 (02) :125-134
[43]   DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers [J].
de Almeida, Bernardo P. ;
Reiter, Franziska ;
Pagani, Michaela ;
Stark, Alexander .
NATURE GENETICS, 2022, 54 (05) :613-+
[44]   Topology of mammalian developmental enhancers and their regulatory landscapes [J].
de Laat, Wouter ;
Duboule, Denis .
NATURE, 2013, 502 (7472) :499-506
[45]   Individual human cortical progenitors can produce excitatory and inhibitory neurons [J].
Delgado, Ryan N. ;
Allen, Denise E. ;
Keefe, Matthew G. ;
Leon, Walter R. Mancia ;
Ziffra, Ryan S. ;
Crouch, Elizabeth E. ;
Alvarez-Buylla, Arturo ;
Nowakowski, Tomasz J. .
NATURE, 2022, 601 (7893) :397-+
[46]   Controlling Long-Range Genomic Interactions at a Native Locus by Targeted Tethering of a Looping Factor [J].
Deng, Wulan ;
Lee, Jongjoo ;
Wang, Hongxin ;
Miller, Jeff ;
Reik, Andreas ;
Gregory, Philip D. ;
Dean, Ann ;
Blobel, Gerd A. .
CELL, 2012, 149 (06) :1233-1244
[47]   The gene regulatory basis of genetic compensation during neural crest induction [J].
Dooley, Christopher M. ;
Wali, Neha ;
Sealy, Ian M. ;
White, Richard J. ;
Stemple, Derek L. ;
Collins, John E. ;
Busch-Nentwich, Elisabeth M. .
PLOS GENETICS, 2019, 15 (06)
[48]  
Dottori M, 2001, DEVELOPMENT, V128, P4127
[49]   Is a super-enhancer greater than the sum of its parts? [J].
Dukler, Noah ;
Gulko, Brad ;
Huang, Yi-Fei ;
Siepel, Adam .
NATURE GENETICS, 2017, 49 (01) :2-4
[50]   Development of melanocyte precursors from the vertebrate neural crest [J].
Dupin, E ;
Le Douarin, NM .
ONCOGENE, 2003, 22 (20) :3016-3023