Statistical integration of allele frequencies from several organizations

被引:0
作者
Jeong, Su Jin [1 ]
Lee, Hyo-jung [2 ]
Lee, Soong Deok [3 ]
Park, Su Jeong [4 ]
Lee, Seung Hwan [4 ]
Lee, Jae Won [5 ]
机构
[1] Kyung Hee Univ, Stat Support Part, Med Ctr, 23 Kyunghee Daero, Seoul 02447, South Korea
[2] DonaA ST, Prod Dev HQ, 64 Cheonho Daero, Seoul, 130823, South Korea
[3] Seoul Natl Univ, Coll Med, Dept Forens Med, Seoul 110799, South Korea
[4] Supreme Prosecutors Off, Div Forens Genet & Chem, Seoul 06590, South Korea
[5] Korea Univ, Dept Stat, 145 Anam Ro, Seoul 136701, South Korea
基金
新加坡国家研究基金会;
关键词
Short Tandem Repeats; Allele; Genotype; Integrated frequency; Hardy-Weinberg equilibrium; Korean population; PROBABILITY; GENETICS;
D O I
10.1007/s42952-023-00243-2
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
Genetic evidence, especially evidence based on short tandem repeats, is of paramount importance for human identification in forensic inferences. In recent years, the identification of kinship using DNA evidence has drawn much attention in various fields. In particular, it is employed, using a criminal database, to confirm blood relations in forensics. The interpretation of the likelihood ratio when identifying an individual or a relationship depends on the allele frequencies that are used, and thus, it is crucial to obtain an accurate estimate of allele frequency. Each organization such as Supreme Prosecutors' Office and Korean National Police Agency in Korea provides different statistical interpretations due to differing estimations of the allele frequency, which can lead to confusion in forensic identification. Therefore, it is very important to estimate allele frequency accurately, and doing so requires a certain amount of information. However, simply using a weighted average for each allele frequency may not be sufficient to determine biological independence. In this study, we propose a new statistical method for estimating allele frequency by integrating the data obtained from several organizations, and we analyze biological independence and differences in allele frequency relative to the weighted average of allele frequencies in various subgroups. Finally, our proposed method is illustrated using real data from 576 Korean individuals.
引用
收藏
页码:208 / 221
页数:14
相关论文
共 14 条
  • [1] Balding David J., 2005, STAT PRACT, Vfirst
  • [2] Multi-locus match probability in a finite population: a fundamental difference between the Moran and Wright-Fisher models
    Bhaskar, Anand
    Song, Yun S.
    [J]. BIOINFORMATICS, 2009, 25 (12) : I187 - I195
  • [3] Recommendations of the DNA Commission of the International Society for Forensic Genetics (ISFG) on quality control of autosomal Short Tandem Repeat allele frequency databasing (STRidER)
    Bodner, Martin
    Bastisch, Ingo
    Butler, John M.
    Fimmers, Rolf
    Gill, Peter
    Gusmao, Leonor
    Morling, Niels
    Phillips, Christopher
    Prinz, Mechthild
    Schneider, Peter M.
    Parson, Walther
    [J]. FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2016, 24 : 97 - 102
  • [4] BOTSTEIN D, 1980, AM J HUM GENET, V32, P314
  • [5] Butler JM, 2012, ADVANCED TOPICS IN FORENSIC DNA TYPING: METHODOLOGY, P1
  • [6] Fung WK., 2008, STAT DNA FORENSICS T
  • [7] PERFORMING THE EXACT TEST OF HARDY-WEINBERG PROPORTION FOR MULTIPLE ALLELES
    GUO, SW
    THOMPSON, EA
    [J]. BIOMETRICS, 1992, 48 (02) : 361 - 372
  • [8] BLOOD SAMPLES - PROBABILITY OF DISCRIMINATION
    JONES, DA
    [J]. JOURNAL OF THE FORENSIC SCIENCE SOCIETY, 1972, 12 (02): : 355 - &
  • [9] Improving human forensics through advances in genetics, genomics and molecular biology
    Kayser, Manfred
    de Knijff, Peter
    [J]. NATURE REVIEWS GENETICS, 2011, 12 (03) : 179 - 192
  • [10] Paternity determination when the alleged father's genotypes are unavailable
    Lee, JW
    Lee, HS
    Park, M
    Hwang, JJ
    [J]. FORENSIC SCIENCE INTERNATIONAL, 2001, 123 (2-3) : 202 - 210