Exploring breast cancer exosomes for novel biomarkers of potential diagnostic and prognostic importance

被引:6
作者
Alagundagi, Dhananjay B. B. [1 ]
Ghate, Sudeep D. D. [2 ]
Rajendra, Vinay Kumar J. [3 ]
Gollapalli, Pavan [2 ]
Shetty, Vijith V. V. [3 ]
D'Souza, Caren [4 ]
Shetty, Praveenkumar [5 ]
Patil, Prakash [1 ]
机构
[1] NITTE Deemed Univ, K S Hegde Med Acad, Cent Res Lab, Mangaluru 575018, Karnataka, India
[2] NITTE Deemed Univ, K S Hegde Med Acad, Ctr Bioinformat & Biostat, Mangaluru 575018, Karnataka, India
[3] NITTE Deemed Univ, Justice K S Hegde Charitable Hosp, K S Hegde Med Acad, Dept Oncol, Mangaluru 575018, Karnataka, India
[4] NITTE Deemed Univ, Justice K S Hegde Charitable Hosp, K S Hegde Med Acad, Dept Gen Surg, Mangaluru 575018, Karnataka, India
[5] NITTE Deemed Univ, K S Hegde Med Acad, Cent Res Lab, Dept Biochem, Mangaluru 575018, Karnataka, India
关键词
Chaperone; Chaperonin; Exosomes; Hub genes; Network biology; Protein-protein interaction; GENE-EXPRESSION; HSP90; TELOMERASE; INHIBITION; SURVIVAL; ENOLASE-1; PROTEINS; TARGET;
D O I
10.1007/s13205-022-03422-w
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The comprehensive bioinformatics analysis of breast cancer exosomes revealed that HSP90AA1, CCT2, and ENO1 were novel hub genes in the giant protein-protein interaction network of 110 exosomal proteins. Exosomes and their cargo such as discrete proteins, nucleic acids, and lipids are having potential role in the pathophysiology of breast cancer (BC). This study showed that the identified hub genes were particularly abundant in GO and KEGG pathways relevant to the positive regulation of telomerase. In addition, these hub genes were found to be considerably overexpressed in breast adenocarcinoma patients compared to healthy controls, and further, this overexpression is linked to the poor prognosis in BC patients. Furthermore, the ROC analysis revealed that CCT2 gene has strong diagnostic and prognostic value for BC. Additionally, this in silico analysis found that the anticancer agents and HSP90 inhibitors such as ganetespib, retaspimycin, and tanespimycin would have considerable potential in the treatment of BC. Overall, this study findings imply that HSP90AA1, a molecular chaperon and CCT2, a chaperonin would serve as diagnostic and prognostic biomarkers, respectively, for BC. However, these findings need to be further confirmed by laboratory and clinical studies for validating their potential applications.
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页数:11
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