Rational Design of Cyclodextrin Glycosyltransferase with Improved Hesperidin Glycosylation Activity

被引:4
作者
Chen, Hanchi [1 ,2 ]
Wang, Jiajun [1 ,2 ]
Liu, Yi [1 ,2 ]
Chen, Yongfan [1 ,2 ]
Wang, Chunfeng [1 ,2 ]
Zhu, Linjiang [1 ,2 ]
Lu, Yuele [1 ,2 ]
Chen, Xiaolong [1 ,2 ]
机构
[1] Zhejiang Univ Technol, Coll Biotechnol & Bioengn, Huzhou 313200, Peoples R China
[2] Zhejiang Univ Technol, Inst Fermentat Technol, Huzhou 313200, Peoples R China
基金
中国国家自然科学基金;
关键词
cyclodextrin glycosyltransferase; rational design; flex-ddG; hesperidin; glycosylation; GLUCANOTRANSFERASE; CONFORMATION; ANTIOXIDANT; SOLUBILITY; CATALYSIS; ENZYMES;
D O I
10.3390/catal13050885
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Cyclodextrin glycosyltransferase (CGTase) can catalyze the glycosylation of hesperidin, resulting in a-glycosyl hesperidin with significantly improved water solubility. In this study, a rational design of CGTase to improve its hesperidin glycosylation activity was investigated. The strategy we employed involved docking hesperidin in its near-attack conformation and virtually mutating the surrounding residues, followed by calculating the changes in binding energy using Rosetta flex-ddG. The mutations with a stabilization effect were then subjected to an activity assay. Starting from CGTase-Y217F, we obtained three double-point mutants, Y217F/M351F, Y217F/M351L, and Y217F/D393H, with improved hesperidin glycosylation activities after screening twenty variants. The best variant, Y217F/D393H, exhibited a catalytic activity of 1305 U/g, and its kcat/KmA is 2.36 times higher compared to CGTase-Y217F and 15.14 times higher compared to the wild-type CGTase. Molecular dynamic simulations indicated that hesperidin was repulsed by CGTase-Y217F when bound in a near-attack conformation. However, by introducing a second-point mutation with a stabilization effect, the repulsion effect is weakened, resulting in a reduction in the distances between the bond-forming atoms and, thus, favoring the reaction.
引用
收藏
页数:11
相关论文
共 40 条
  • [21] Supplementation with biscuits enriched with hesperidin and naringenin is associated with an improvement of the Metabolic Syndrome induced by a cafeteria diet in rats
    Mayneris-Perxachs, Jordi
    Maria Alcaide-Hidalgo, Juan
    de la Hera, Esther
    Maria del Bas, Josep
    Arola, Lluis
    Caimari, Antoni
    [J]. JOURNAL OF FUNCTIONAL FOODS, 2019, 61
  • [22] Synthesis of a Novel α-Glucosyl Ginsenoside F1 by Cyclodextrin Glucanotransferase and Its In Vitro Cosmetic Applications
    Moon, Seong Soo
    Lee, Hye Jin
    Mathiyalagan, Ramya
    Kim, Yu Jin
    Yang, Dong Uk
    Lee, Dae Young
    Min, Jin Woo
    Jimenez, Zuly
    Yang, Deok Chun
    [J]. BIOMOLECULES, 2018, 8 (04):
  • [23] Cloning of the cyclodextrin glucanotransferase gene from alkalophilic Bacillus sp A2-5a and analysis of the raw starch-binding domain
    Ohdan, K
    Kuriki, T
    Takata, H
    Okada, S
    [J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2000, 53 (04) : 430 - 434
  • [24] Antioxidant and Anti-Inflammatory Properties of the Citrus Flavonoids Hesperidin and Hesperetin: An Updated Review of their Molecular Mechanisms and Experimental Models
    Parhiz, Hamideh
    Roohbakhsh, Ali
    Soltani, Fatemeh
    Rezaee, Ramin
    Iranshahi, Mehrdad
    [J]. PHYTOTHERAPY RESEARCH, 2015, 29 (03) : 323 - 331
  • [25] Review: Protein design - Where we were, where we are, where we're going
    Pokala, N
    Handel, TM
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2001, 134 (2-3) : 269 - 281
  • [26] Accounting for the instantaneous disorder in the enzyme-substrate Michaelis complex to calculate the Gibbs free energy barrier of an enzyme reaction
    Romero-Tellez, Sonia
    Cruz, Alejandro
    Masgrau, Laura
    Gonzalez-Lafont, Angels
    Lluch, Jose M.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2021, 23 (23) : 13042 - 13054
  • [27] Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction
    Smith, Colin A.
    Kortemme, Tanja
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2008, 380 (04) : 742 - 756
  • [28] New Sustainable Process for Hesperidin Isolation and Anti-Ageing Effects of Hesperidin Nanocrystals
    Stanisic, Danijela
    Liu, Leticia H. B.
    dos Santos, Roney V.
    Costa, Amanda F.
    Duran, Nelson
    Tasic, Ljubica
    [J]. MOLECULES, 2020, 25 (19):
  • [29] Past, present, and future of cyclodextrin research
    Szejtli, J
    [J]. PURE AND APPLIED CHEMISTRY, 2004, 76 (10) : 1825 - 1845
  • [30] Enhanced 2-O-α-D-Glucopyranosyl-L-ascorbic Acid Synthesis through Iterative Saturation Mutagenesis of Acceptor Subsite Residues in Bacillus stearothermophilus NO2 Cyclodextrin Glycosyltransferase
    Tao, Xiumei
    Wang, Tian
    Su, Lingqia
    Wu, Jing
    [J]. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2018, 66 (34) : 9052 - 9060