The multiple activations in budding yeast S-phase checkpoint are Poisson processes

被引:0
作者
Gao, Xin [1 ]
Zhou, Peijie [2 ]
Li, Fangting [1 ]
机构
[1] Peking Univ, Ctr Quantitat Biol, Sch Phys, Beijing 100871, Peoples R China
[2] Univ Calif Irvine, Dept Math, Irvine, CA 92697 USA
来源
PNAS NEXUS | 2023年 / 2卷 / 11期
关键词
budding yeast; S-phase checkpoint; stochasticity; Poisson activation process; DNA-REPLICATION; PHOSPHORYLATION; KINASE; NOISE; SPECIFICITY; HYDROXYUREA; MECHANISM;
D O I
10.1093/pnasnexus/pgad342
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Eukaryotic cells activate the S-phase checkpoint signal transduction pathway in response to DNA replication stress. Affected by the noise in biochemical reactions, such activation process demonstrates cell-to-cell variability. Here, through the analysis of microfluidics-integrated time-lapse imaging, we found multiple S-phase checkpoint activations in a certain budding yeast cell cycle. Yeast cells not only varied in their activation moments but also differed in the number of activations within the cell cycle, resulting in a stochastic multiple activation process. By investigating dynamics at the single-cell level, we showed that stochastic waiting times between consecutive activations are exponentially distributed and independent from each other. Finite DNA replication time provides a robust upper time limit to the duration of multiple activations. The mathematical model, together with further experimental evidence from the mutant strain, revealed that the number of activations under different levels of replication stress agreed well with Poisson distribution. Therefore, the activation events of S-phase checkpoint meet the criterion of Poisson process during DNA replication. In sum, the observed Poisson activation process may provide new insights into the complex stochastic dynamics of signal transduction pathways.
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页数:12
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