Molecular interaction of heparin and proteins-A relationship with SARS-CoV-2

被引:0
|
作者
Ramos, Thaynara S. V. [1 ]
Valverde, Joao V. P. [1 ]
de Oliveira, Tiego J. C. [1 ]
da Silva, Romario J. [3 ]
Stefani, Ricardo [2 ]
Silva, Josmary R. [1 ]
de Souza, Nara C. [1 ,4 ]
机构
[1] Univ Fed Mato Grosso, Grp Mat Nanoestruturados GMN, Barra Do Garcas, MT, Brazil
[2] Univ Fed Mato Grosso, Lab Estudos Mat, LEMat, Barra Garcas, MT, Brazil
[3] Univ Fed Pernambuco, Dept Fis, Recife, PE, Brazil
[4] Univ Fed Goias, Lab Nanosistemas & Tecnol, LabNano, Aparecida De Goiania, GO, Brazil
关键词
Association constant; Microscopy; Fractal dimension; Molecular dynamics; COVID-19; BOVINE SERUM-ALBUMIN; DIFFUSION-LIMITED AGGREGATION; BINDING; INHIBITION; DOCKING;
D O I
10.1016/j.molstruc.2024.137559
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Interactions between proteins and drugs can lead to the formation of stable complexes and have important implications for several processes related to human health. These interactions can affect, for example, the distribution, free concentration, biological activity and metabolism of drugs in the bloodstream. This work presents an investigation based on spectrophotometry (UV-Vis) on the interaction of albumin with heparin (HEP) in aqueous solution and in the form of films, under physiological conditions. Results from analytical models, molecular dynamics and calculations of binding constants indicate that increasing temperature leads to a decrease in the molecular interaction of HEP with albumin, with dynamic interaction, and secondary bonds. Morphological analyzes with fractality assessment corroborate the results. Simulation results suggest that the interaction of HEP with the SARS-CoV-2 spike protein should be stronger, with little variation over time. The weak interaction between HEP and albumin contributes to greater availability of the drug, which inhibits viral invasion in addition to disrupting microthrombi that prevent oxygenation in patients infected with SARS-CoV-2. The investigation of biological systems in solutions or in the form of films has allowed the analysis of complex formation using unconventional pharmacokinetic techniques.
引用
收藏
页数:12
相关论文
共 50 条
  • [21] Structural and molecular perspectives of SARS-CoV-2
    Kumar, Swatantra
    Saxena, Shailendra K.
    METHODS, 2021, 195 : 23 - 28
  • [22] Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins
    Nunez-Castilla, Janelle
    Stebliankin, Vitalii
    Baral, Prabin
    Balbin, Christian A.
    Sobhan, Masrur
    Cickovski, Trevor
    Mondal, Ananda Mohan
    Narasimhan, Giri
    Chapagain, Prem
    Mathee, Kalai
    Siltberg-Liberles, Jessica
    VIRUSES-BASEL, 2022, 14 (07):
  • [23] An insight into SARS-CoV-2 membrane protein interaction with spike, envelope, and nucleocapsid proteins
    Kumar, Prateek
    Kumar, Amit
    Garg, Neha
    Giri, Rajanish
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2021, : 1062 - 1071
  • [24] An overview of human proteins and genes involved in SARS-CoV-2 infection
    Jahanafrooz, Zohreh
    Chen, Zhishan
    Bao, Jiandong
    Li, Hongzhi
    Lipworth, Loren
    Guo, Xingyi
    GENE, 2022, 808
  • [25] In silico characterization of mutations circulating in SARS-CoV-2 structural proteins
    Periwal, Neha
    Rathod, Shravan B.
    Pal, Ranjan
    Sharma, Priya
    Nebhnani, Lata
    Barnwal, Ravi P.
    Arora, Pooja
    Srivastava, Kinshuk Raj
    Sood, Vikas
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2022, 40 (18) : 8216 - 8231
  • [26] Effect of SARS-CoV-2 proteins on vascular permeability
    Rauti, Rossana
    Shahoha, Meishar
    Leichtmann-Bardoogo, Yael
    Nasser, Rami
    Paz, Eyal
    Tamir, Rina
    Miller, Victoria
    Babich, Tal
    Shaked, Kfir
    Ehrlich, Avner
    Ioannidis, Konstantinos
    Nahmias, Yaakov
    Sharan, Roded
    Ashery, Uri
    Maoz, Ben Meir
    ELIFE, 2021, 10
  • [27] Structural biology of SARS-CoV-2 accessory proteins
    Briggs, David C.
    Kandler, Luise
    Schmidt, Lisa
    Santoni, Gianluca
    Thorn, Andrea
    CRYSTALLOGRAPHY REVIEWS, 2023, 29 (01) : 3 - 18
  • [28] Online biophysical predictions for SARS-CoV-2 proteins
    Luciano Kagami
    Joel Roca-Martínez
    Jose Gavaldá-García
    Pathmanaban Ramasamy
    K. Anton Feenstra
    Wim F. Vranken
    BMC Molecular and Cell Biology, 22
  • [29] Synthesis of novel coumarin analogues: Investigation of molecular docking interaction of SARS-CoV-2 proteins with natural and synthetic coumarin analogues and their pharmacokinetics studies
    Chidambaram, Sathishkumar
    El-Sheikh, Mohamed A.
    Alfarhan, Ahmed H.
    Radhakrishnan, Surendrakumar
    Akbar, Idhayadhulla
    SAUDI JOURNAL OF BIOLOGICAL SCIENCES, 2021, 28 (01) : 1100 - 1108
  • [30] Fitness effects of mutations to SARS-CoV-2 proteins
    Bloom, Jesse D.
    Neher, Richard A.
    VIRUS EVOLUTION, 2023, 9 (02)