Identification and Expression Analysis of the bHLH Gene Family Members in Diospyros kaki

被引:6
作者
Han, Weijuan [1 ]
Zhang, Qi [1 ,2 ]
Suo, Yujing [1 ]
Li, Huawei [1 ]
Diao, Songfeng [1 ]
Sun, Peng [1 ]
Huang, Lin [1 ]
Fu, Jianmin [1 ]
机构
[1] Chinese Acad Forestry, Res Inst Nontimber Forestry, Key Lab Nontimber Forest Germplasm Enhancement & U, 3 Weiwu Rd, Zhengzhou 450003, Peoples R China
[2] Inner Mongolia Agr Univ, Coll Forestry, Hohhot 010018, Peoples R China
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
proanthocyanidin (PA) biosynthesis; gene family; bHLH genes; persimmon; bioinformatics; TRANSCRIPTION FACTOR FAMILY; PROANTHOCYANIDIN BIOSYNTHESIS; FLAVONOID BIOSYNTHESIS; GENOME-WIDE; ANTHOCYANIN; ARABIDOPSIS; PROTEIN; ACCUMULATION; PATHWAY; TT8;
D O I
10.3390/horticulturae9030380
中图分类号
S6 [园艺];
学科分类号
0902 ;
摘要
Basic helix-loop-helix (bHLH) proteins belong to one of the largest families involved in plant growth, development, signal transduction, and secondary metabolism. Although bHLH genes have been previously identified in persimmon (Diospyros kaki), systematic studies have not been reported. A total of 59 bHLH family members have been identified from the "Xiaoguotianshi" persimmon transcriptome. These proteins were clustered into 12 groups from I to XII based on their phylogenetic relationships with Arabidopsis thaliana. Combined with the phylogenetic analysis, in silico expression patterns of five developmental stages, the protein-protein interaction analysis between DkbHLH and DkMYB proteins showed that the bHLH_Cluster-15548.1 protein sequence was identified to be highly similar to the AtGL3 (AT5G41315.1) protein, which is associated with flavonoid and proanthocyanidin (PA) biosynthesis. This study presents the systematic analysis of bHLH genes from D. kaki and provides valuable information for further research on the involvement of bHLH protein in anthocyanin biosynthesis.
引用
收藏
页数:12
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