Towards Reduced Order Models via Robust Proper Orthogonal Decomposition to capture personalised aortic haemodynamics

被引:4
作者
Chatpattanasiri, Chotirawee [1 ]
Franzetti, Gaia [1 ]
Bonfanti, Mirko [1 ]
Diaz-Zuccarini, Vanessa [1 ,2 ]
Balabani, Stavroula [1 ]
机构
[1] UCL, Dept Mech Engn, London, England
[2] UCL, Wellcome EPSRC Ctr Intervent & Surg Sci WEISS, Dept Med Phys & Biomed Engn, London, England
基金
英国工程与自然科学研究理事会;
关键词
Aortic haemodynamics; Particle image velocimetry; Computational fluid dynamics; Reduced Order Model; Proper orthogonal decomposition; Robust principle component analysis; Patient-specific modelling; COMPUTATIONAL FLUID-DYNAMICS; BLOOD-FLOW;
D O I
10.1016/j.jbiomech.2023.111759
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Data driven, reduced order modelling has shown promise in tackling the challenges associated with computational and experimental haemodynamic models. In this work, we focus on the use of Reduced Order Models (ROMs) to reconstruct velocity fields in a patient-specific dissected aorta, with the objective being to compare the ROMs obtained from Robust Proper Orthogonal Decomposition (RPOD) to those obtained from the traditional Proper Orthogonal Decomposition (POD). POD and RPOD are applied to in vitro, haemodynamic data acquired by Particle Image Velocimetry and compare the decomposed flows to those derived from Computational Fluid Dynamics (CFD) data for the same geometry and flow conditions. In this work, PIV and CFD results act as surrogates for clinical haemodynamic data e.g. MR, helping to demonstrate the potential use of ROMS in real clinical scenarios. The flow is reconstructed using different numbers of POD modes and the flow features obtained throughout the cardiac cycle are compared to the original Full Order Models (FOMs). Robust Principal Component Analysis (RPCA), the first step of RPOD, has been found to enhance the quality of PIV data, allowing POD to capture most of the kinetic energy of the flow in just two modes similar to the numerical data that are free from measurement noise. The reconstruction errors differ along the cardiac cycle with diastolic flows requiring more modes for accurate reconstruction. In general, modes 1-10 are found sufficient to represent the flow field. The results demonstrate that the coherent structures that characterise this aortic dissection flow are described by the first few POD modes suggesting that it is possible to represent the macroscale behaviour of aortic flow in a low-dimensional space; thus significantly simplifying the problem, and allowing for more computationally efficient flow simulations or machine learning based flow predictions that can pave the way for translation of such models to the clinic.
引用
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页数:11
相关论文
共 41 条
  • [11] Robust Principal Component Analysis?
    Candes, Emmanuel J.
    Li, Xiaodong
    Ma, Yi
    Wright, John
    [J]. JOURNAL OF THE ACM, 2011, 58 (03)
  • [12] A reduced-order model for wall shear stress in abdominal aortic aneurysms by proper orthogonal decomposition
    Chang, Gary Han
    Schirmer, Clemens M.
    Modarres-Sadeghi, Yahya
    [J]. JOURNAL OF BIOMECHANICS, 2017, 54 : 33 - 43
  • [13] An overview of the proper generalized decomposition with applications in computational rheology
    Chinesta, F.
    Ammar, A.
    Leygue, A.
    Keunings, R.
    [J]. JOURNAL OF NON-NEWTONIAN FLUID MECHANICS, 2011, 166 (11) : 578 - 592
  • [14] Reduced-order modeling of left ventricular flow subject to aortic valve regurgitation
    Di Labbio, Giuseppe
    Kadem, Lyes
    [J]. PHYSICS OF FLUIDS, 2019, 31 (03)
  • [15] Decomposition of flow structures in stirred reactors and implications for mixing enhancement
    Ducci, Andrea
    Doulgerakis, Zacharias
    Yianneskis, Michael
    [J]. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH, 2008, 47 (10) : 3664 - 3676
  • [16] Towards extraction of orthogonal and parsimonious non-linear modes from turbulent flows
    Eivazi, Hamidreza
    Le Clainche, Soledad
    Hoyas, Sergio
    Vinuesa, Ricardo
    [J]. EXPERT SYSTEMS WITH APPLICATIONS, 2022, 202
  • [17] Farahbakhsh I, 2020, Krylov Subspace Methods with Application in Incompressible Fluid Flow Solvers, DOI [10.1002/9781119618737, DOI 10.1002/9781119618737]
  • [18] Denoising and spatial resolution enhancement of 4D flow MRI using proper orthogonal decomposition and lasso regularization
    Fathi, Mojtaba F.
    Bakhshinejad, Ali
    Baghaie, Ahmadreza
    Saloner, David
    Sacho, Raphael H.
    Rayz, Vitally L.
    D'Souza, Roshan M.
    [J]. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2018, 70 : 165 - 172
  • [19] Wall Shear Stress Estimation of Thoracic Aortic Aneurysm Using Computational Fluid Dynamics
    Febina, J.
    Sikkandar, Mohamed Yacin
    Sudharsan, N. M.
    [J]. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE, 2018, 2018
  • [20] Franzetti G., 2019, J. Eng. Sci. Med. Diagn. Ther., V2, DOI DOI 10.1115/1.4044488