The complete chloroplast genome of Euphorbia prostrata (Euphorbiaceae)

被引:0
|
作者
Oh, Ami [1 ]
Kang, Eun Su [2 ]
Son, Dong-Chan [2 ]
Lee, Soo-Rang [1 ]
机构
[1] Chosun Univ, Dept Biol Educ, Gwangju 61452, South Korea
[2] Korea Natl Arboretum, Div Forest Biodivers, Pochon, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 02期
关键词
Euphorbia; euphorbia prostrata; Euphorbiaceae; phylogenetic analysis; plastome; COMPLETE PLASTOME SEQUENCE; MOLECULAR PHYLOGENETICS; CLASSIFICATION; CROTON;
D O I
10.1080/23802359.2024.2313039
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Euphorbia prostrata Aiton 1789, an annual herb, is native to tropical and subtropical Americas and was introduced into many parts of the Old-World including Korea. We determined the genomic characteristics of the complete chloroplast genome of E. prostrata with a de novo assembly strategy. The complete chloroplast genome was 162,858 bp long, and harbored 86 protein coding, 37 tRNA and 8 rRNA. The genome showed the typical quadripartite structure consisting of a large single copy (LSC) (90,580 bp), a small single copy (SSC) (18,570 bp) and a pair of inverted repeats (IRs) (26,854 bp). The phylogenetic tree inferred from chloroplast genomes of 25 taxa, which belong to Euphorbiaceae indicated that the Euphorbia is a monophyletic group and E. prostrata is closely related with E. humifusa, E. thymifolia and E. hirta, forming a well-supported clade. Our findings can be valuable for understanding the phylogenetic relationships and the evolution in Euphorbiaceae and will provide basic information for future studies on E. prostrata from genomic perspective.
引用
收藏
页码:267 / 271
页数:5
相关论文
共 50 条
  • [41] The complete chloroplast genome of Cupressus chengiana
    Zhang, Zi-long
    Ma, Li-ying
    Yao, Hongbin
    Yang, Xin
    Luo, Ji-huai
    Gong, Xue
    Wei, Shuo-yue
    Li, Quan-fang
    Wang, Wei
    Sun, Hong-bin
    CONSERVATION GENETICS RESOURCES, 2017, 9 (03) : 347 - 349
  • [42] The complete chloroplast genome of Allium fistulosum
    Yusupov, Ziyoviddin
    Deng, Tao
    Liu, Changkun
    Lin, Nan
    Tojibaev, Komiljon
    Sun, Hang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 489 - 490
  • [43] The Complete Chloroplast Genome of Colpomenia sinuosa
    Wang, X.
    Song, L.
    Fu, Y.
    He, Y. Y.
    Qu, Ch.
    Miao, J.
    Xie, W.
    RUSSIAN JOURNAL OF GENETICS, 2025, 61 (01) : 129 - 132
  • [44] The complete chloroplast genome of Androsace mariae
    Guo, Yupeng
    Ma, Rui
    Xie, Jun
    Liu, Qiujuan
    Zhu, Ye
    Yang, Wenjing
    Gao, Lina
    Ma, Yanjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 376 - 377
  • [45] The complete chloroplast genome of Potentilla chinensis
    Dang, Han
    Xu, Jinshi
    Jin, Zhao
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1180 - 1181
  • [46] The complete chloroplast genome of Rosa berberifolia
    Zhang, Shu-Dong
    Zhang, Chao
    Ling, Li-Zhen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1741 - 1742
  • [47] The complete chloroplast genome of Swertia cordata
    Huang, Li
    Chen, Chunlin
    Yang, Qiao
    Yang, Wenjie
    Hu, Quanjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3818 - 3819
  • [48] The complete chloroplast genome of Bothriochloa ischaemum
    Li, Yu-ying
    Xu, Hong-yu
    Zhong, Hua
    Yang, Zhi-qing
    Dong, Kuan-hu
    Xia, Fang-shan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05): : 844 - 845
  • [49] The complete chloroplast genome of Sargassum fusiforme
    Liu, Tao
    Cui, Yutong
    Jia, Xuli
    Chen, Binbin
    Ma, Zengling
    Zou, Huixi
    Wang, Shengqin
    Wu, Mingjiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 576 - 577
  • [50] The complete chloroplast genome of Streblus indicus
    Yang, Dejun
    Qiu, Qiong
    Xu, Linhong
    Xu, Yumei
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2815 - 2816