Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer's disease

被引:1
|
作者
Ma, Wenhao [1 ,2 ,3 ]
Su, Yuelin [4 ]
Zhang, Peng [2 ]
Wan, Guoqing [1 ,2 ]
Cheng, Xiaoqin [5 ]
Lu, Changlian [1 ,2 ]
Gu, Xuefeng [1 ,2 ]
机构
[1] Shanghai Univ Med & Hlth Sci, Sch Pharm, Shanghai, Peoples R China
[2] Shanghai Univ Med & Hlth Sci, Shanghai Key Lab Mol Imaging, Shanghai, Peoples R China
[3] Univ Shanghai Sci & Technol, Sch Hlth Sci & Engn, Shanghai, Peoples R China
[4] Fudan Univ, Dept Ultrasound Med, Huashan Hosp, Shanghai, Peoples R China
[5] Fudan Univ, Zhongshan Hosp, Dept Neurol, Shanghai, Peoples R China
来源
FRONTIERS IN MOLECULAR NEUROSCIENCE | 2023年 / 16卷
基金
中国国家自然科学基金;
关键词
Alzheimer's disease; mitochondrial autophagy; mitochondrial-related genes; biomarkers; prediction model; subtyping; BLOOD-BRAIN-BARRIER; SYNAPTIC VESICLE CYCLE; AMYLOID-BETA; HELICOBACTER-PYLORI; 5-HT3; RECEPTOR; VDAC1; DYSFUNCTION; MITOPHAGY; PATHOLOGY; TOXICITY;
D O I
10.3389/fnmol.2023.1205541
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
IntroductionAlzheimer's disease (AD) is a progressive and debilitating neurodegenerative disorder prevalent among older adults. Although AD symptoms can be managed through certain treatments, advancing the understanding of underlying disease mechanisms and developing effective therapies is critical. MethodsIn this study, we systematically analyzed transcriptome data from temporal lobes of healthy individuals and patients with AD to investigate the relationship between AD and mitochondrial autophagy. Machine learning algorithms were used to identify six genes-FUNDC1, MAP1LC3A, CSNK2A1, VDAC1, CSNK2B, and ATG5-for the construction of an AD prediction model. Furthermore, AD was categorized into three subtypes through consensus clustering analysis. ResultsThe identified genes are closely linked to the onset and progression of AD and can serve as reliable biomarkers. The differences in gene expression, clinical features, immune infiltration, and pathway enrichment were examined among the three AD subtypes. Potential drugs for the treatment of each subtype were also identified. DiscussionThe findings observed in the present study can help to deepen the understanding of the underlying disease mechanisms of AD and enable the development of precision medicine and personalized treatment approaches.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Identification of Copper Metabolism Related Biomarkers, Polygenic Prediction Model, and Potential Therapeutic Agents in Alzheimer's Disease
    Du, Yuanyuan
    Chen, Xi
    Zhang, Bin
    Jin, Xing
    Wan, Zemin
    Zhan, Min
    Yan, Jun
    Zhang, Pengwei
    Ke, Peifeng
    Huang, Xianzhang
    Han, Liqiao
    Zhang, Qiaoxuan
    JOURNAL OF ALZHEIMERS DISEASE, 2023, 95 (04) : 1481 - 1496
  • [2] Systematic identification of key basement membrane related genes as potential new biomarkers in Alzheimer's disease
    Lin, Jia'xing
    Chen, Jing
    Huang, Cheng
    CLINICAL NEUROLOGY AND NEUROSURGERY, 2024, 236
  • [3] Genes related to neurotransmitter receptors as potential biomarkers for Alzheimer's disease
    Chen, Wei
    Zhang, Taoyuan
    Zhang, Hui
    NEUROSCIENCE LETTERS, 2024, 832
  • [4] Transcriptomic and epigenomic landscapes of Alzheimer's disease evidence mitochondrial-related pathways
    Marmolejo-Garza, Alejandro
    Medeiros-Furquim, Tiago
    Rao, Ramya
    Eggen, Bart J. L.
    Boddeke, Erik
    Dolga, Amalia M.
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2022, 1869 (10):
  • [5] Alterations in Mitochondrial Dynamic-related Genes in the Peripheral Blood of Alzheimer's Disease Patients
    Pakpian, Nattaporn
    Phopin, Kamonrat
    Kitidee, Kuntida
    Govitrapong, Piyarat
    Wongchitrat, Prapimpun
    CURRENT ALZHEIMER RESEARCH, 2020, 17 (07) : 616 - 625
  • [6] Identification of potential biomarkers for pathogenesis of Alzheimer’s disease
    Huimin Wang
    Xiujiang Han
    Sheng Gao
    Hereditas, 158
  • [7] Identification of potential biomarkers for pathogenesis of Alzheimer's disease
    Wang, Huimin
    Han, Xiujiang
    Gao, Sheng
    HEREDITAS, 2021, 158 (01)
  • [8] Ferroptosis-related biomarkers for Alzheimer's disease: Identification by bioinformatic analysis in hippocampus
    Wang, Binyang
    Fu, Chenyang
    Wei, Yuanyuan
    Xu, Bonan
    Yang, Rongxing
    Li, Chuanxiong
    Qiu, Meihua
    Yin, Yong
    Qin, Dongdong
    FRONTIERS IN CELLULAR NEUROSCIENCE, 2022, 16
  • [9] Salivary Biomarkers for Alzheimer's Disease and Related Disorders
    Ashton, Nicholas J.
    Ide, Mark
    Zetterberg, Henrik
    Blennow, Kaj
    NEUROLOGY AND THERAPY, 2019, 8 (SUPPL 2) : S83 - S94
  • [10] The role of mitochondrial-related nuclear genes in age-related common disease
    Li, Huanzheng
    Slone, Jesse
    Huang, Taosheng
    MITOCHONDRION, 2020, 53 : 38 - 47