Aliidiomarina quisquiliarum sp. nov., isolated from landfill leachate

被引:0
作者
Zhang, Xuan-qi [1 ]
Xamxidin, Maripat [2 ]
Li, Jing-hang [1 ]
Zhang, Xin-yin [3 ]
Wang, Tao [4 ]
Chen, Can [2 ]
Wu, Min [2 ]
Ke, Han [1 ]
机构
[1] Zhejiang Univ, Coll Civil Engn & Architecture, Hangzhou 310058, Peoples R China
[2] Zhejiang Univ, Coll Life Sci, Hangzhou 310058, Peoples R China
[3] Zhejiang Univ, Sch Med, Natl Clin Res Ctr Child Hlth, Childrens Hosp, Hangzhou 310058, Peoples R China
[4] Univ Georgia, Dept Microbiol, Athens, GA USA
关键词
Aliidiomarina; landfill; leachate; draft genome; phylogenetic analysis; HALOALKALIPHILIC BACTERIUM; EMENDED DESCRIPTION; FAMILY; FLAVOBACTERIACEAE; PROPOSAL; CELLS;
D O I
10.1099/ijsem.0.005685
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Bacterial strain Y-6T, isolated from a landfill site in Yiwu, PR China, was characterized using a polyphasic taxonomy approach. Cells were Gram- stain-negative, aerobic, rod-shaped, motile by means of a single polar flagellum and formed pale beige colo-nies. Strain Y-6T grew at 4-40 degrees C (optimal at 30-37 degrees C), pH 6.5-9.5 (optimal at pH 7.2-8.5) and in the presence of 0.5-10.0 % (w/v) NaCl (optimal at 1.0-3.0 %). Phylogenetic analysis revealed that strain Y -6T was a member of the genus Aliidiomarina and closely related to Aliidiomarina taiwanensis MCCC 1A06493T with a 16S rRNA sequence similarity of 98.2 %. The major cellular fatty acids of the isolate were iso-C15:0, C16:0, iso-C17: 0 and summed feature 9 (iso-C17: 1 omega 9c and/or 10-methyl-C16:0). Q-8 was the predominant ubiquinone. The major polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethan-olamine, aminoglycophospholipid, aminophospholipid, phospholipid, three glycolipids and two unknown lipids. The genomic DNA G+C content was 46.6mol%. The digital DNA-DNA hybridization value between Y -6T and A. taiwanensis MCCC 1A06493T was 18.3 %. Strain Y -6T had an average nucleotide identity value of 74.09 % with A. taiwanensis MCCC 1A06493T. Results from the polyphasic taxonomy study support the conclusion that strain Y -6T represents a novel Aliidiomarina species, for which the name Aliidiomarina quisquiliarum sp.nov. is proposed. The type strain is Y -6T (=MCCC 1K06228T=KCTC 82676T).
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