Cofilin-Membrane Interactions: Electrostatic Effects in Phosphoinositide Lipid Binding

被引:6
|
作者
Prakash, Shikha [1 ]
Krishna, Anjali [1 ,2 ]
Sengupta, Durba [1 ]
机构
[1] Natl Chem Lab, CSIR, Dr Homi Bhabha Rd, Pune 411008, Maharashtra, India
[2] Univ Auckland, Sch Biol Sci, Auckland 1010, New Zealand
关键词
complex membrane; lipid clustering; martini coarse-grain simulations; molecular dynamics simulations; protein-lipid interactions; ACTIN DEPOLYMERIZING FACTOR; FORCE-FIELD; CELLULAR FUNCTIONS; ALPHA-SYNUCLEIN; COMPLEX ROLES; PIP2; ADF/COFILIN; DYNAMICS; DOMAINS; IDENTIFICATION;
D O I
10.1002/cphc.202200509
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The actin cytoskeleton interacts with the cell membrane primarily through the indirect interactions of actin-binding proteins such as cofilin-1. The molecular mechanisms underlying the specific interactions of cofilin-1 with membrane lipids are still unclear. Here, we performed coarse-grain molecular dynamics simulations of cofilin-1 with complex lipid bilayers to analyze the specificity of protein-lipid interactions. We observed the maximal interactions with phosphoinositide (PIP) lipids, especially PIP2 and PIP3 lipids. A good match was observed between the residues predicted to interact and previous experimental studies. The clustering of PIP lipids around the membrane bound protein leads to an overall lipid demixing and gives rise to persistent membrane curvature. Further, through a series of control simulations, we observe that both electrostatics and geometry are critical for specificity of lipid binding. Our current study is a step towards understanding the physico-chemical basis of cofilin-PIP lipid interactions.
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页数:10
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