Background: Traditional methods for chemical library generation in virtual screening often impose limitations on the accessible chemical space or produce synthetically irrelevant structures. Incorporating common chemical reactions into generative algorithms could offer significant benefits. Materials & methods: In this study, we developed NeuroClick, a graphical user interface software designed to perform in silico azide-alkyne cycloaddition, a widely utilized synthetic approach in modern medicinal chemistry. Results & conclusion: NeuroClick facilitates the generation and filtering of large combinatorial libraries at a remarkable rate of 10,000 molecules per minute. Moreover, the generated products can be filtered to identify subsets of pharmaceutically relevant compounds based on Lipinski's rule of five and blood-brain barrier permeability prediction. We demonstrate the utility of NeuroClick by generating and filtering several thousand molecules for dopamine D3 receptor ligand screening. [GRAPHICS] .
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[1]
Alahmari Abeer, 2021, Neural Plast, V2021, P6564585, DOI 10.1155/2021/6564585
机构:
Univ Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USAUniv Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
Durrant, Jacob D.
McCammon, J. Andrew
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Univ Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92093 USAUniv Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
机构:
Pharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
El Sawy, Maged A.
Elshatanofy, Maram M.
论文数: 0引用数: 0
h-index: 0
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Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Elshatanofy, Maram M.
El Kilany, Yeldez
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h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
El Kilany, Yeldez
Kandeel, Kamal
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h-index: 0
机构:
Alexandria Univ, Dept Biochem, Fac Sci, Alexandria 21547, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Kandeel, Kamal
Elwakil, Bassma H.
论文数: 0引用数: 0
h-index: 0
机构:
Pharos Univ Alexandria, Fac Appl Hlth Sci Technol, Dept Med Lab Technol, Alexandria 21311, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Elwakil, Bassma H.
Hagar, Mohamed
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h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Hagar, Mohamed
Aouad, Mohamed Reda
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Aouad, Mohamed Reda
Albelwi, Fawzia Faleh
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Albelwi, Fawzia Faleh
Rezki, Nadjet
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Rezki, Nadjet
Jaremko, Mariusz
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机构:
King Abdullah Univ Sci & Technol KAUST, Div Biol & Environm Sci & Engn BESE, Smart Hlth Initiat SHI, POB 4700, Thuwal 239556900, Saudi Arabia
King Abdullah Univ Sci & Technol KAUST, Div Biol & Environm Sci & Engn BESE, Red Sea Res Ctr RSRC, POB 4700, Thuwal 239556900, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Jaremko, Mariusz
El Ashry, El Sayed H.
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
机构:
Univ Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USAUniv Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
Durrant, Jacob D.
McCammon, J. Andrew
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92093 USA
Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92093 USAUniv Calif San Diego, Dept Chem & Biochem, NSF Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
机构:
Pharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
El Sawy, Maged A.
Elshatanofy, Maram M.
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Elshatanofy, Maram M.
El Kilany, Yeldez
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
El Kilany, Yeldez
Kandeel, Kamal
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Biochem, Fac Sci, Alexandria 21547, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Kandeel, Kamal
Elwakil, Bassma H.
论文数: 0引用数: 0
h-index: 0
机构:
Pharos Univ Alexandria, Fac Appl Hlth Sci Technol, Dept Med Lab Technol, Alexandria 21311, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Elwakil, Bassma H.
Hagar, Mohamed
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Hagar, Mohamed
Aouad, Mohamed Reda
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Aouad, Mohamed Reda
Albelwi, Fawzia Faleh
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Albelwi, Fawzia Faleh
Rezki, Nadjet
论文数: 0引用数: 0
h-index: 0
机构:
Taibah Univ, Dept Chem, Fac Sci, Al Madinah Al Munawarah 30002, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Rezki, Nadjet
Jaremko, Mariusz
论文数: 0引用数: 0
h-index: 0
机构:
King Abdullah Univ Sci & Technol KAUST, Div Biol & Environm Sci & Engn BESE, Smart Hlth Initiat SHI, POB 4700, Thuwal 239556900, Saudi Arabia
King Abdullah Univ Sci & Technol KAUST, Div Biol & Environm Sci & Engn BESE, Red Sea Res Ctr RSRC, POB 4700, Thuwal 239556900, Saudi ArabiaPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt
Jaremko, Mariusz
El Ashry, El Sayed H.
论文数: 0引用数: 0
h-index: 0
机构:
Alexandria Univ, Dept Chem, Fac Sci, Alexandria 21321, EgyptPharos Univ, Dept Pharmaceut Chem, Fac Pharm, Alexandria 21311, Egypt