Multigene Panel Sequencing Identifies a Novel Germline Mutation Profile in Male Breast Cancer Patients

被引:6
作者
Al Saati, Ayman [1 ,2 ,3 ]
Vande Perre, Pierre [1 ,2 ]
Plenecassagnes, Julien [4 ]
Gilhodes, Julia [5 ]
Monselet, Nils [5 ]
Cabarrou, Bastien [5 ]
Lignon, Norbert [6 ]
Filleron, Thomas [5 ]
Telly, Dominique [1 ]
Perello-Lestrade, Emilie [1 ]
Feillel, Viviane [6 ]
Staub, Anne [6 ]
Martinez, Mathilde [7 ]
Chipoulet, Edith [6 ]
Collet, Gaelle [6 ]
Thomas, Fabienne [2 ,3 ,8 ]
Gladieff, Laurence [6 ]
Toulas, Christine [1 ,2 ]
机构
[1] IUCT Oncopole, Oncogenet Lab, Oncopole Claudius Regaud, Toulouse, France
[2] Ctr Rech Cancerol Toulouse, INSERM, DIAD, Toulouse, France
[3] Univ Toulouse, Univ Toulouse III Paul Sabatier, Toulouse, France
[4] IUCT Oncopole, Bioinformat Dept, Oncopole Claudius Regaud, Toulouse, France
[5] IUCT Oncopole, Biostat Dept, Oncopole Claudius Regaud, Toulouse, France
[6] IUCT Oncopole, Oncogenet Dept, Oncopole Claudius Regaud, Toulouse, France
[7] ONCORAD Clin Pasteur, Oncol Dept, Toulouse, France
[8] IUCT Oncopole, Pharmacol Dept, Oncopole Claudius Regaud, Toulouse, France
关键词
male breast cancer predisposition; large multigene panel sequencing; MBC-specific mutated profile; new genes potentially involved in MBC risk; GENE; RISK; POLYMORPHISMS; ASSOCIATION; GENOMICS;
D O I
10.3390/ijms241814348
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Even though male breast cancer (MBC) risk encompasses both genetic and environmental aetiologies, the primary risk factor is a germline pathogenic variant (PV) or likely pathogenic variant (LPV) in BRCA2, BRCA1 and/or PALB2 genes. To identify new potential MBC-specific predisposition genes, we sequenced a panel of 585 carcinogenesis genes in an MBC cohort without BRCA1/BRCA2/PALB2 PV/LPV. We identified 14 genes carrying rare PVs/LPVs in the MBC population versus noncancer non-Finnish European men, predominantly coding for DNA repair and maintenance of genomic stability proteins. We identified for the first time PVs/LPVs in PRCC (pre-mRNA processing), HOXA9 (transcription regulation), RECQL4 and WRN (maintenance of genomic stability) as well as in genes involved in other cellular processes. To study the specificity of this MBC PV/LPV profile, we examined whether variants in the same genes could be detected in a female breast cancer (FBC) cohort without BRCA1/BRCA2/PALB2 PV/LPV. Only 5/109 women (4.6%) carried a PV/LPV versus 18/85 men (21.2%) on these genes. FBC did not carry any PV/LPV on 11 of these genes. Although 5.9% of the MBC cohort carried PVs/LPVs in PALLD and ERCC2, neither of these genes were altered in our FBC cohort. Our data suggest that in addition to BRCA1/BRCA2/PALB2, other genes involved in DNA repair/maintenance or genomic stability as well as cell adhesion may form a specific MBC PV/LPV signature.
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页数:15
相关论文
共 49 条
[1]   Is male breast cancer similar or different than female breast cancer? [J].
Anderson, WF ;
Althuis, MD ;
Brinton, LA ;
Devesa, SS .
BREAST CANCER RESEARCH AND TREATMENT, 2004, 83 (01) :77-86
[2]   Analysis of Epigenetic Alterations in Homologous Recombination DNA Repair Genes in Male Breast Cancer [J].
Andre, Saudade ;
Nunes, Sandra P. ;
Silva, Fernanda ;
Henrique, Rui ;
Felix, Ana ;
Jeronimo, Carmen .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (08)
[3]   Molecular regulators of HOXA9 in acute myeloid leukemia [J].
Aryal, Sajesan ;
Zhang, Yang ;
Wren, Spencer ;
Li, Chunliang ;
Lu, Rui .
FEBS JOURNAL, 2023, 290 (02) :321-339
[4]   UniProt: the Universal Protein Knowledgebase in 2023 [J].
Bateman, Alex ;
Martin, Maria-Jesus ;
Orchard, Sandra ;
Magrane, Michele ;
Ahmad, Shadab ;
Alpi, Emanuele ;
Bowler-Barnett, Emily H. ;
Britto, Ramona ;
Cukura, Austra ;
Denny, Paul ;
Dogan, Tunca ;
Ebenezer, ThankGod ;
Fan, Jun ;
Garmiri, Penelope ;
Gonzales, Leonardo Jose da Costa ;
Hatton-Ellis, Emma ;
Hussein, Abdulrahman ;
Ignatchenko, Alexandr ;
Insana, Giuseppe ;
Ishtiaq, Rizwan ;
Joshi, Vishal ;
Jyothi, Dushyanth ;
Kandasaamy, Swaathi ;
Lock, Antonia ;
Luciani, Aurelien ;
Lugaric, Marija ;
Luo, Jie ;
Lussi, Yvonne ;
MacDougall, Alistair ;
Madeira, Fabio ;
Mahmoudy, Mahdi ;
Mishra, Alok ;
Moulang, Katie ;
Nightingale, Andrew ;
Pundir, Sangya ;
Qi, Guoying ;
Raj, Shriya ;
Raposo, Pedro ;
Rice, Daniel L. ;
Saidi, Rabie ;
Santos, Rafael ;
Speretta, Elena ;
Stephenson, James ;
Totoo, Prabhat ;
Turner, Edward ;
Tyagi, Nidhi ;
Vasudev, Preethi ;
Warner, Kate ;
Watkins, Xavier ;
Zellner, Hermann .
NUCLEIC ACIDS RESEARCH, 2023, 51 (D1) :D523-D531
[5]   Genetic Landscape of Male Breast Cancer [J].
Batista Campos, Fernando Augusto ;
Rouleau, Etienne ;
Torrezan, Giovana Tardin ;
Carraro, Dirce Maria ;
Casali da Rocha, Jose Claudio ;
Mantovani, Higor Kassouf ;
da Silva, Leonardo Roberto ;
Bueno de Toledo Osorio, Cynthia Aparecida ;
Sanches, Solange Moraes ;
Caputo, Sandrine M. ;
dos Santos, Elizabeth Santana .
CANCERS, 2021, 13 (14)
[6]   Identification of novel candidate genes by exome sequencing in Tunisian familial male breast cancer patients [J].
Ben Kridis-Rejeb, Wala ;
Ben Ayed-Guerfali, Dorra ;
Ammous-Boukhris, Nihel ;
Ayadi, Wajdi ;
Kifagi, Chamseddine ;
Charfi, Slim ;
Saguem, Ines ;
Sellami-Boudawara, Tahia ;
Daoud, Jamel ;
Khanfir, Afef ;
Mokdad-Gargouri, Raja .
MOLECULAR BIOLOGY REPORTS, 2020, 47 (09) :6507-6516
[7]   Prospective Evaluation of Risk Factors for Male Breast Cancer [J].
Brinton, Louise A. ;
Richesson, Douglas A. ;
Gierach, Gretchen L. ;
Lacey, James V., Jr. ;
Park, Yikyung ;
Hollenbeck, Albert R. ;
Schatzkin, Arthur .
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2008, 100 (20) :1477-U9
[8]   Anthropometric and Hormonal Risk Factors for Male Breast Cancer: Male Breast Cancer Pooling Project Results [J].
Brinton, Louise A. ;
Cook, Michael B. ;
McCormack, Valerie ;
Johnson, Kenneth C. ;
Olsson, Hakan ;
Casagrande, John T. ;
Cooke, Rosie ;
Falk, Roni T. ;
Gapstur, Susan M. ;
Gaudet, Mia M. ;
Gaziano, J. Michael ;
Gkiokas, Georgios ;
Guenel, Pascal ;
Henderson, Brian E. ;
Hollenbeck, Albert ;
Hsing, Ann W. ;
Kolonel, Laurence N. ;
Isaacs, Claudine ;
Lubin, Jay H. ;
Michels, Karin B. ;
Negri, Eva ;
Parisi, Dominick ;
Petridou, Eleni Th. ;
Pike, Malcolm C. ;
Riboli, Elio ;
Sesso, Howard D. ;
Snyder, Kirk ;
Swerdlow, Anthony J. ;
Trichopoulos, Dimitrios ;
Ursin, Giske ;
van den Brandt, Piet A. ;
Van Den Eeden, Stephen K. ;
Weiderpass, Elisabete ;
Willett, Walter C. ;
Ewertz, Marianne ;
Thomas, David B. .
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2014, 106 (03)
[9]   Clonal hematopoiesis as a pitfall in germline variant interpretation in the context of Mendelian disorders [J].
Brunet, Theresa ;
Berutti, Riccardo ;
Dill, Veronika ;
Hecker, Judith S. ;
Choukair, Daniela ;
Andres, Stephanie ;
Deschauer, Marcus ;
Diehl-Schmid, Janine ;
Krenn, Martin ;
Eckstein, Gertrud ;
Graf, Elisabeth ;
Gasser, Thomas ;
Strom, Tim M. ;
Hoefele, Julia ;
Goetze, Katharina S. ;
Meitinger, Thomas ;
Wagner, Matias .
HUMAN MOLECULAR GENETICS, 2022, 31 (14) :2386-2395
[10]   Male breast cancer risk associated with pathogenic variants in genes other than BRCA1/2: an Italian case-control study [J].
Bucalo, Agostino ;
Conti, Giulia ;
Valentini, Virginia ;
Capalbo, Carlo ;
Bruselles, Alessandro ;
Tartaglia, Marco ;
Bonanni, Bernardo ;
Calistri, Daniele ;
Coppa, Anna ;
Cortesi, Laura ;
Giannini, Giuseppe ;
Gismondi, Viviana ;
Manoukian, Siranoush ;
Manzella, Livia ;
Montagna, Marco ;
Peterlongo, Paolo ;
Radice, Paolo ;
Russo, Antonio ;
Tibiletti, Maria Grazia ;
Turchetti, Daniela ;
Viel, Alessandra ;
Zanna, Ines ;
Palli, Domenico ;
Silvestri, Valentina ;
Ottini, Laura .
EUROPEAN JOURNAL OF CANCER, 2023, 188 :183-191