Machine and Deep Learning Algorithms for COVID-19 Mortality Prediction Using Clinical and Radiomic Features

被引:2
作者
Verzellesi, Laura [1 ]
Botti, Andrea [1 ]
Bertolini, Marco [1 ]
Trojani, Valeria [1 ]
Carlini, Gianluca [2 ]
Nitrosi, Andrea [1 ]
Monelli, Filippo [3 ]
Besutti, Giulia [3 ,4 ]
Castellani, Gastone [5 ]
Remondini, Daniel [2 ,6 ]
Milanese, Gianluca [7 ,8 ]
Croci, Stefania [9 ]
Sverzellati, Nicola [7 ,8 ]
Salvarani, Carlo [4 ,10 ]
Iori, Mauro [1 ]
机构
[1] Azienda USL IRCCS Reggio Emilia, Med Phys Unit, I-42123 Reggio Emilia, Italy
[2] Univ Bologna, Dept Phys & Astron DIFA, I-40126 Bologna, Italy
[3] Azienda USL IRCCS Reggio Emilia, Radiol Unit, I-42123 Reggio Emilia, Italy
[4] Univ Modena & Reggio Emilia, Dept Med & Surg Sci, I-41124 Modena, Italy
[5] IRCCS Policlin S Orsola, Dept Expt Diagnost & Specialty Med DIMES, I-40126 Bologna, Italy
[6] INFN, Sez Bologna, I-40127 Bologna, Italy
[7] Azienda Osped Univ Parma, Dept Med, Radiol Sci, I-43126 Parma, Italy
[8] Azienda Osped Univ Parma, Surg Unit, I-43126 Parma, Italy
[9] Azienda USL IRCCS Reggio Emilia, Clin Immunol Allergy & Adv Biotechnol Unit, I-42123 Reggio Emilia, Italy
[10] Azienda USL IRCCS Reggio Emilia, Radiol Unit, I-42123 Reggio Emilia, Italy
关键词
machine learning; deep learning; radiomics; COVID-19; mortality; HRCT; imbalance dataset; ARTIFICIAL-INTELLIGENCE; MODEL; PROGRESSION;
D O I
10.3390/electronics12183878
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Aim: Machine learning (ML) and deep learning (DL) predictive models have been employed widely in clinical settings. Their potential support and aid to the clinician of providing an objective measure that can be shared among different centers enables the possibility of building more robust multicentric studies. This study aimed to propose a user-friendly and low-cost tool for COVID-19 mortality prediction using both an ML and a DL approach. Method: We enrolled 2348 patients from several hospitals in the Province of Reggio Emilia. Overall, 19 clinical features were provided by the Radiology Units of Azienda USL-IRCCS of Reggio Emilia, and 5892 radiomic features were extracted from each COVID-19 patient's high-resolution computed tomography. We built and trained two classifiers to predict COVID-19 mortality: a machine learning algorithm, or support vector machine (SVM), and a deep learning model, or feedforward neural network (FNN). In order to evaluate the impact of the different feature sets on the final performance of the classifiers, we repeated the training session three times, first using only clinical features, then employing only radiomic features, and finally combining both information. Results: We obtained similar performances for both the machine learning and deep learning algorithms, with the best area under the receiver operating characteristic (ROC) curve, or AUC, obtained exploiting both clinical and radiomic information: 0.803 for the machine learning model and 0.864 for the deep learning model. Conclusions: Our work, performed on large and heterogeneous datasets (i.e., data from different CT scanners), confirms the results obtained in the recent literature. Such algorithms have the potential to be included in a clinical practice framework since they can not only be applied to COVID-19 mortality prediction but also to other classification problems such as diabetic prediction, asthma prediction, and cancer metastases prediction. Our study proves that the lesion's inhomogeneity depicted by radiomic features combined with clinical information is relevant for COVID-19 mortality prediction.
引用
收藏
页数:14
相关论文
共 75 条
[1]   Comparison of deep learning with regression analysis in creating predictive models for SARS-CoV-2 outcomes [J].
Abdulaal, Ahmed ;
Patel, Aatish ;
Charani, Esmita ;
Denny, Sarah ;
Alqahtani, Saleh A. ;
Davies, Gary W. ;
Mughal, Nabeela ;
Moore, Luke S. P. .
BMC MEDICAL INFORMATICS AND DECISION MAKING, 2020, 20 (01)
[2]   Prognostic Modeling of COVID-19 Using Artificial Intelligence in the United Kingdom: Model Development and Validation [J].
Abdulaal, Ahmed ;
Patel, Aatish ;
Charani, Esmita ;
Denny, Sarah ;
Mughal, Nabeela ;
Moore, Luke .
JOURNAL OF MEDICAL INTERNET RESEARCH, 2020, 22 (08)
[3]  
Ahmed S, 2020, medRxiv, DOI [10.1101/2020.07.11.20149112, 10.1101/2020.07.11.20149112, DOI 10.1101/2020.07.11.20149112]
[4]   Random forest method for the recognition of susceptibility and resistance patterns in antibiograms [J].
Ayala-Aldana, Nicolas ;
Gonzalez-Valdes, Leticia .
REVISTA CHILENA DE INFECTOLOGIA, 2023, 40 (01) :76-77
[5]   Machine learning prediction for mortality of patients diagnosed with COVID-19: a nationwide Korean cohort study [J].
An, Chansik ;
Lim, Hyunsun ;
Kim, Dong-Wook ;
Chang, Jung Hyun ;
Choi, Yoon Jung ;
Kim, Seong Woo .
SCIENTIFIC REPORTS, 2020, 10 (01)
[6]   Artificial Intelligence and the Medical Physicist: Welcome to the Machine [J].
Avanzo, Michele ;
Trianni, Annalisa ;
Botta, Francesca ;
Talamonti, Cinzia ;
Stasi, Michele ;
Iori, Mauro .
APPLIED SCIENCES-BASEL, 2021, 11 (04) :1-17
[7]  
aview-lung, Coreline
[8]   Predicting Mechanical Ventilation and Mortality in COVID-19 Using Radiomics and Deep Learning on Chest Radiographs: A Multi-Institutional Study [J].
Bae, Joseph ;
Kapse, Saarthak ;
Singh, Gagandeep ;
Gattu, Rishabh ;
Ali, Syed ;
Shah, Neal ;
Marshall, Colin ;
Pierce, Jonathan ;
Phatak, Tej ;
Gupta, Amit ;
Green, Jeremy ;
Madan, Nikhil ;
Prasanna, Prateek .
DIAGNOSTICS, 2021, 11 (10)
[9]   Machine-learning-based COVID-19 mortality prediction model and identification of patients at low and high risk of dying [J].
Banoei, Mohammad M. ;
Dinparastisaleh, Roshan ;
Zadeh, Ali Vaeli ;
Mirsaeidi, Mehdi .
CRITICAL CARE, 2021, 25 (01)
[10]   Predicting cancer outcomes with radiomics and artificial intelligence in radiology [J].
Bera, Kaustav ;
Braman, Nathaniel ;
Gupta, Amit ;
Velcheti, Vamsidhar ;
Madabhushi, Anant .
NATURE REVIEWS CLINICAL ONCOLOGY, 2022, 19 (02) :132-146