Streptomyces marispadix sp. nov., isolated from marine beach sediment

被引:1
作者
dos Santos, Jose Diogo Neves [1 ,2 ]
Vitorino, Ines Rosado [1 ,2 ]
Kallscheuer, Nicolai [3 ]
Srivastava, Akash [4 ]
Krautwurst, Sebastian [4 ]
Marz, Manja [4 ]
Jogler, Christian [3 ]
Lobo-da-Cunha, Alexandre [5 ]
Catita, Jose [6 ,7 ]
Goncalves, Hugo [6 ]
Gonzalez, Ignacio [8 ]
Reyes, Fernando [8 ]
Lage, Olga Maria [1 ,2 ]
机构
[1] Univ Porto, Fac Sci, Dept Biol, Rua Campo Alegre S-N, P-4169007 Porto, Portugal
[2] Univ Porto, Interdisciplinary Ctr Marine & Environm Res, Ave Gen Norton de Matos S-N, P-4450208 Matosinhos, Portugal
[3] Friedrich Schiller Univ, Fac Biol Sci, Dept Microbial Interact, Philosophenweg 12, D-07743 Jena, Thuringia, Germany
[4] Friedrich Schiller Univ, Fac Math & Comp Sci, RNA Bioinformat & High Throughput Anal, Leutragraben 1, D-07743 Jena, Thuringia, Germany
[5] Univ Porto, Sch Med & Biomed Sci ICBAS, Dept Microscopy, Rua Jorge de Viterbo Ferreira 228, P-4050313 Porto, Portugal
[6] Paralab SA, Valbom, Portugal
[7] Univ Fernando Pessoa, Fac Ciencias Saude, FP BHS, FP I3ID, Rua Carlos da Maia 296, P-4200150 Porto, Portugal
[8] Fdn MEDINA, Ctr Excelencia Invest Medicamentos Innovadores And, Ave Conocimiento,34 Parque Tecnol Ciencias Salud, Granada 18016, Spain
关键词
antimicrobial activity; Actinomycetota; genome mining; novel taxa; Streptomyces; GENOME; CLASSIFICATION; NOMENCLATURE; DIVERSITY; DATABASE; NAMES; LIST; LPSN;
D O I
10.1099/ijsem.0.005956
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel actinomycetal strain, designated M600PL45_2T, was isolated from marine sediments obtained from Ingleses beach, Porto, on the Northern Coast of Portugal and was subjected to a polyphasic taxonomic characterisation study. The here described Gram- reaction- positive strain is characterised by the production of a brown pigment in both solid and liquid medium and forms typical helical hyphae that differentiate into smooth spores. The results of a phylogenetic analysis based on the 16S rRNA gene sequence indicated that M600PL45_2T has a high similarity to two members of the genus Streptomyces, Streptomyces bathyalis ASO4wetT (98.51 %) and Streptomyces daqingensis NEAU ZJC8T (98.44 %). The genome of M600PL45_2T has a size of 6 695 159 bp, a DNA G+C content of 70.71 mol% and 5538 coding sequences. M600PL45_2T grows at 15-37 & DEG;C and with a maximal growth rate between 25 & DEG;C and 30 & DEG;C. Growth at pH 6.0 to 9.0 with the optimal range between 6.0 and 7.5 was observed. M600PL45_2T showed a high salinity tolerance, growing with 0-10 % (w/v) NaCl, with best growth with 1-3% (w/v) NaCl. Major cellular fatty acids are iso- C15:0 (25.03 %), anteiso- C15:0 (17.70) and iso- C16:0 (26.90 %). The novel isolate was able to grow in media containing a variety of nitrogen and carbon sources. An antimicrobial activity screening indicated that an extract of M600PL45_2T has inhibitory activity against Staphylococcus aureus. On the basis of the polyphasic data, M600PL45_2T (= CECT 30365T = DSM 114036T) is introduced as the type strain of a novel species, that we named Streptomyces marispadix sp. nov.
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页数:11
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