Rapid Onsite Visual Detection of Orf Virus Using a Recombinase-Aided Amplification Assay

被引:1
作者
Cui, Huan [1 ]
Guan, Jiyu [1 ]
Lu, Huijun [2 ]
Liu, Jun [3 ]
Tu, Fei [3 ]
Zhang, Cheng [4 ]
Su, Kai [4 ]
Guo, Zhendong [3 ]
Zhao, Kui [1 ]
机构
[1] Jilin Univ, Coll Vet Med, Changchun 130062, Peoples R China
[2] Jilin Univ, Inst Zoonosis, Key Lab Zoonosis, Minist Educ, Changchun 130062, Peoples R China
[3] Chinese Acad Agr Sci, Changchun Vet Res Inst, Changchun 130122, Peoples R China
[4] Hebei Agr Univ, Coll Vet Med, 2596 Lucky South St, Baoding 071000, Peoples R China
来源
LIFE-BASEL | 2023年 / 13卷 / 02期
关键词
recombinase-aided amplification (RAA); ORFV; isothermal amplification; rapid diagnosis; DNA extraction-free; MEDIATED ISOTHERMAL AMPLIFICATION; TIME PCR ASSAY; PHYLOGENETIC ANALYSIS; JILIN PROVINCE; DNA; SHEEP; IDENTIFICATION; EVOLUTION;
D O I
10.3390/life13020494
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Orf is an important zoonotic disease caused by the Orf virus (ORFV) which can cause contagious pustular dermatitis in goats and sheep. Orf is widespread in most sheep-raising countries in the world, causing huge economic losses. Although diagnostic methods for ORFV infection already exist, it is still necessary to develop a time-saving, labor-saving, specific, low-cost and visual diagnostic method for rapid detection of ORFV in the field and application in grassroots laboratories. This study establishes a DNA extraction-free, real-time, visual recombinase-aided amplification (RAA) method for the rapid detection of ORFV. This method is specific to ORFV and does not cross-react with other common DNA viruses. The detection limits of the real-time RAA and visual judgment of the RAA assay at 95% probability were 13 and 21 copies per reaction for ORFV, respectively. Compared with qPCR, the sensitivity and specificity of the real-time RAA assay were 100%, and those of the visual RAA assay were 92.31% and 100.0%, respectively. The DNA extraction-free visual detection method of RAA established in this study can meet the needs of rapid onsite detection and grassroots laboratories and has important reference value and significance for the early diagnosis of diseased animals.
引用
收藏
页数:13
相关论文
共 61 条
[21]  
Hosamani Madhusudan, 2009, Expert Rev Anti Infect Ther, V7, P879, DOI 10.1586/eri.09.64
[22]   Recombinase polymerase amplification: Emergence as a critical molecular technology for rapid, low-resource diagnostics [J].
James, Ameh ;
Macdonald, Joanne .
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2015, 15 (11) :1475-1489
[23]   Combination of Isothermal Recombinase-Aided Amplification and CRISPR-Cas12a-Mediated Assay for Rapid Detection of Major Severe Acute Respiratory Syndrome Coronavirus 2 Variants of Concern [J].
Lin, Hongqing ;
Liang, Yuanhao ;
Zou, Lirong ;
Li, Baisheng ;
Zhao, Jianhui ;
Wang, Haiying ;
Sun, Jiufeng ;
Deng, Xiaoling ;
Tang, Shixing .
FRONTIERS IN MICROBIOLOGY, 2022, 13
[24]  
MULLIS KB, 1987, METHOD ENZYMOL, V155, P335
[25]   The diagnostic performance of classical molecular tests used for detecting human papillomavirus [J].
Munoz, Marina ;
Camargo, Milena ;
Soto-De Leon, Sara C. ;
Rojas-Villarraga, Adriana ;
Sanchez, Ricardo ;
Jaimes, Camilo ;
Perez-Prados, Antonio ;
Patarroyo, Manuel E. ;
Patarroyo, Manuel A. .
JOURNAL OF VIROLOGICAL METHODS, 2012, 185 (01) :32-38
[26]   Development of a duplex recombinase-aided amplification assay for direct detection of Mycoplasma pneumoniae and Chlamydia trachomatis in clinical samples [J].
Nie, Ming-Zhu ;
Zhang, Rui-Qing ;
Zhao, Meng-Chuan ;
Tan, He ;
Hu, Ya-Xin ;
Fan, Guo-Hao ;
Li, Jing-Yi ;
He, An-Na ;
Tian, Feng-Yu ;
Li, Feng-Yu ;
Zheng, Ye-Huan ;
Shen, Xin-Xin ;
Tie, Yan-Qing ;
Ma, Xue-Jun .
JOURNAL OF MICROBIOLOGICAL METHODS, 2022, 198
[27]   Fluorescence-Based Bioassays for the Detection and Evaluation of Food Materials [J].
Nishi, Kentaro ;
Isobe, Shin-Ichiro ;
Zhu, Yun ;
Kiyama, Ryoiti .
SENSORS, 2015, 15 (10) :25831-25867
[28]   Loop-mediated isothermal amplification of DNA [J].
Notomi, Tsugunori ;
Okayama, Hiroto ;
Masubuchi, Harumi ;
Yonekawa, Toshihiro ;
Watanabe, Keiko ;
Amino, Nobuyuki ;
Hase, Tetsu .
NUCLEIC ACIDS RESEARCH, 2000, 28 (12)
[29]   Phylogenetic analysis and characterization of Korean orf virus from dairy goats: case report [J].
Oem, Jae-Ku ;
Roh, In-Soon ;
Lee, Kyung-Hyun ;
Lee, Kyoung-Ki ;
Kim, Hye-Ryoung ;
Jean, Young-Hwa ;
Lee, O-Soo .
VIROLOGY JOURNAL, 2009, 6
[30]   DNA detection using recombination proteins [J].
Piepenburg, Olaf ;
Williams, Colin H. ;
Stemple, Derek L. ;
Armes, Niall A. .
PLOS BIOLOGY, 2006, 4 (07) :1115-1121