Use of Support Vector Machines Approach via ComBat Harmonized Diffusion Tensor Imaging for the Diagnosis and Prognosis of Mild Traumatic Brain Injury: A CENTER-TBI Study

被引:7
|
作者
Pinto, Maira Siqueira [1 ,2 ,3 ]
Winzeck, Stefan [6 ,7 ]
Kornaropoulos, Evgenios N. [7 ]
Richter, Sophie [7 ]
Paolella, Roberto [2 ,3 ,10 ]
Correia, Marta M. [8 ]
Glocker, Ben [6 ]
Williams, Guy [9 ]
Vik, Anne [11 ,12 ]
Posti, Jussi P. [14 ,15 ,16 ]
Haberg, Asta [11 ,13 ]
Stenberg, Jonas [11 ,13 ]
Guns, Pieter-Jan [4 ]
den Dekker, Arnold J. [2 ,3 ]
Menon, David K. [7 ]
Sijbers, Jan [2 ,3 ]
Van Dyck, Pieter [1 ,5 ]
Newcombe, Virginia F. J. [7 ]
机构
[1] Antwerp Univ Hosp, Dept Radiol, Antwerp, Belgium
[2] Univ Antwerp, Imec Vis Lab, Antwerp, Belgium
[3] Univ Antwerp, NEURO Res Ctr Excellence, Antwerp, Belgium
[4] Univ Antwerp, Physiopharmacol, Antwerp, Belgium
[5] Univ Antwerp, MVIS, Antwerp, Belgium
[6] Imperial Coll London, Dept Comp, BioMedIA Grp, London, England
[7] Univ Cambridge, Dept Med, Div Anaesthesia, Cambridge, England
[8] Univ Cambridge, MRC Cognit & Brain Sci Unit, Cambridge, England
[9] Univ Cambridge, Wolfson Brain Imaging Ctr, Dept Neurosci, Cambridge, England
[10] Icometrix, Leuven, Belgium
[11] Norwegian Univ Sci & Technol NTNU, Fac Med & Hlth Sci, Dept Neuromed & Movement Sci, Trondheim, Norway
[12] Trondheim Reg & Univ Hosp, St Olavs Hosp, Dept Neurosurg, Trondheim, Norway
[13] Trondheim Reg & Univ Hosp, St Olavs Hosp, Dept Radiol & Nucl Med, Trondheim, Norway
[14] Turku Univ Hosp, Dept Neurosurg, Turku, Finland
[15] Turku Univ Hosp, Turku Brain Injury Ctr, Turku, Finland
[16] Univ Turku, Turku, Finland
基金
英国工程与自然科学研究理事会; 芬兰科学院; 英国惠康基金; 欧盟地平线“2020”;
关键词
CENTER-TBI; classification; machine learning; mild traumatic brain injury; outcome; recovery; OUTCOME PREDICTION; MRI; CLASSIFICATION; BIOMARKERS; MODELS; CARE;
D O I
10.1089/neu.2022.0365
中图分类号
R4 [临床医学];
学科分类号
1002 ; 100602 ;
摘要
The prediction of functional outcome after mild traumatic brain injury (mTBI) is challenging. Conventional magnetic resonance imaging (MRI) does not do a good job of explaining the variance in outcome, as many patients with incomplete recovery will have normal-appearing clinical neuroimaging. More advanced quantitative techniques such as diffusion MRI (dMRI), can detect microstructural changes not otherwise visible, and so may offer a way to improve outcome prediction. In this study, we explore the potential of linear support vector classifiers (linearSVCs) to identify dMRI biomarkers that can predict recovery after mTBI. Simultaneously, the harmonization of fractional anisotropy (FA) and mean diffusivity (MD) via ComBat was evaluated and compared for the classification performances of the linearSVCs. We included dMRI scans of 179 mTBI patients and 85 controls from the Collaborative European NeuroTrauma Effectiveness Research in Traumatic Brain Injury (CENTER-TBI), a multi-center prospective cohort study, up to 21 days post-injury. Patients were dichotomized according to their Extended Glasgow Outcome Scale (GOSE) scores at 6 months into complete (n = 92; GOSE = 8) and incomplete (n = 87; GOSE <8) recovery. FA and MD maps were registered to a common space and harmonized via the ComBat algorithm. LinearSVCs were applied to distinguish: (1) mTBI patients from controls and (2) mTBI patients with complete from those with incomplete recovery. The linearSVCs were trained on (1) age and sex only, (2) non-harmonized, (3) two-category-harmonized ComBat, and (4) three-category-harmonized ComBat FA and MD images combined with age and sex. White matter FA and MD voxels and regions of interest (ROIs) within the John Hopkins University (JHU) atlas were examined. Recursive feature elimination was used to identify the 10% most discriminative voxels or the 10 most discriminative ROIs for each implementation. mTBI patients displayed significantly higher MD and lower FA values than controls for the discriminative voxels and ROIs. For the analysis between mTBI patients and controls, the three-category-harmonized ComBat FA and MD voxel-wise linearSVC provided significantly higher classification scores (81.4% accuracy, 93.3% sensitivity, 80.3% F1-score, and 0.88 area under the curve [AUC], p < 0.05) compared with the classification based on age and sex only and the ROI approaches (accuracies: 59.8% and 64.8%, respectively). Similar to the analysis between mTBI patients and controls, the three-category-harmonized ComBat FA and MD maps voxelwise approach yields statistically significant prediction scores between mTBI patients with complete and those with incomplete recovery (71.8% specificity, 66.2% F1-score and 0.71 AUC, p < 0.05), which provided a modest increase in the classification score (accuracy: 66.4%) compared with the classification based on age and sex only and ROI-wise approaches (accuracy: 61.4% and 64.7%, respectively). This study showed that ComBat harmonized FA and MD may provide additional information for diagnosis and prognosis of mTBI in a multi-modal machine learning approach. These findings demonstrate that dMRI may assist in the early detection of patients at risk of incomplete recovery from mTBI.
引用
收藏
页码:1317 / 1338
页数:22
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