Automated machine learning-based prediction of the progression of knee pain, functional decline, and incidence of knee osteoarthritis in individuals at high risk of knee osteoarthritis: Data from the osteoarthritis initiative study
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作者:
Chen, Tianrong
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机构:
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R ChinaUniv Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Chen, Tianrong
[1
]
Or, Calvin Kalun
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机构:
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Univ Hong Kong, Dept Ind & Mfg Syst Engn, Room 8-7,8-F,Haking Wong Bldg, Hong Kong, Peoples R ChinaUniv Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
Or, Calvin Kalun
[1
,2
]
机构:
[1] Univ Hong Kong, Dept Ind & Mfg Syst Engn, Hong Kong, Peoples R China
[2] Univ Hong Kong, Dept Ind & Mfg Syst Engn, Room 8-7,8-F,Haking Wong Bldg, Hong Kong, Peoples R China
ObjectiveThis study aimed to examine the performance of machine learning models in predicting the progression of knee pain, functional decline, and incidence of knee osteoarthritis (OA) in high-risk individuals, with automated machine learning (AutoML) being used to automate the prediction process.DesignThere were four stages in the process of our AutoML-integrated prediction. Stage 1-Data preparation: The data of 3200 eligible individuals in the Osteoarthritis Initiative (OAI) study who were considered at high risk of knee OA at the baseline visit were extracted and used. Specifically, 1094 variables from the OAI study were used to predict the changes in knee pain, physical function, and incidence of knee OA (i.e. the first occurrence of frequent knee symptoms and definite tibial osteophytes (Kellgren and Lawrence grade >= 2)) over a 9-year period. Stage 2-Model training: The AutoML approach was used to automatically train nine widely used machine learning (ML) models. Stage 3-Model testing: The AutoML approach was used to automatically test the performance of the ML models. Stage 4-Selection of important input variables: The AutoML approach automated the process of computing the importance scores of all input variables and identifying the most important ones, using the technique of permutation feature importance.ResultsUsing the AutoML approach, the weighted ensemble model and the CatBoost model showed the best performance among all nine ML models. For the prediction of each outcome in each year, the five most important input variables were identified, most of which were obtained from self-reported questionnaire surveys and radiographic imaging reports.ConclusionThe AutoML approach has shown potential in automating the process of using ML models to predict long-term changes in knee OA-related outcomes. Its use could support the deployment of ML solutions, facilitating the provision of personalized interventions to prevent the deterioration of knee health and incident knee OA.
机构:
Harvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Southeast Univ, Sch Publ Hlth, Key Lab Environm Med Engn, Minist Educ, Nanjing, Jiangsu, Peoples R ChinaHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Liu, T.
Xu, C.
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Harvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Rutgers State Univ, Sch Publ Hlth, Dept Biostat & Epidemiol, New Brunswick, NJ USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Xu, C.
Driban, J. B.
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Tufts Med Ctr, Div Rheumatol Allergy & Immunol, Boston, MA 02111 USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Driban, J. B.
McAlindon, T.
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Tufts Med Ctr, Div Rheumatol Allergy & Immunol, Boston, MA 02111 USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
McAlindon, T.
Eaton, C. B.
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Brown Univ, Ctr Primary Care & Prevent, Pawtucket, RI USA
Brown Univ, Dept Family Med, Warren Alpert Med Sch, Providence, RI 02912 USA
Brown Univ, Dept Epidemiol, Warren Alpert Med Sch, Providence, RI 02912 USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Eaton, C. B.
Lu, B.
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Harvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
Univ Connecticut, Sch Med, Dept Publ Hlth Sci, 263 Farmington Ave,MC 6325, Farmington, CT 06030 USAHarvard Med Sch, Brigham & Womens Hosp, Div Rheumatol Inflammat & Immun, Boston, MA 02115 USA
机构:
Lariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Paris Diderot Univ, Paris, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Latourte, Augustin
Rat, Anne-Christine
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Ctr Hosp Reg Nancy, INSERM CIC 1433, Vandoeuvre Les Nancy, France
Univ Lorraine, Ctr Hosp Reg Nancy, Vandoeuvre Les Nancy, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Rat, Anne-Christine
Sime, Willy Ngueyon
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Ctr Hosp Reg Nancy, INSERM CIC 1433, Vandoeuvre Les Nancy, France
Univ Lorraine, Vandoeuvre Les Nancy, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Sime, Willy Ngueyon
Ea, Hang-Korng
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Lariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Paris Diderot Univ, Paris, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Ea, Hang-Korng
Bardin, Thomas
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Lariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Paris Diderot Univ, Paris, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Bardin, Thomas
Mazieres, Bernard
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CHU Toulouse, Toulouse, France
Paul Sabatier Univ, Toulouse, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Mazieres, Bernard
Roux, Christian
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Ctr Hosp Univ Pasteur 2, Lab Motricite, Humaine Expertise Sport Sante EA6309, UMR 7277,CNRS, Sophia Antipolis, France
Univ Nice Sophia Antipolis, Sophia Antipolis, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Roux, Christian
Guillemin, Francis
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Ctr Hosp Reg Nancy, INSERM CIC 1433, Vandoeuvre Les Nancy, France
Univ Lorraine, Vandoeuvre Les Nancy, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Guillemin, Francis
Richette, Pascal
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Lariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
Paris Diderot Univ, Paris, FranceLariboisiere Hosp, AP HP, UFR Med, INSERM U1132, Paris, France
机构:
Univ Calif, Davis Med Ctr, Ctr Hlth Aging, Davis Sch Med, Sacramento, CA 95817 USAUniv Calif, Davis Med Ctr, Ctr Hlth Aging, Davis Sch Med, Sacramento, CA 95817 USA
Wise, Barton L.
Felson, David T.
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机构:Univ Calif, Davis Med Ctr, Ctr Hlth Aging, Davis Sch Med, Sacramento, CA 95817 USA
Felson, David T.
Clancy, Margaret
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机构:Univ Calif, Davis Med Ctr, Ctr Hlth Aging, Davis Sch Med, Sacramento, CA 95817 USA
Clancy, Margaret
Niu, Jingbo
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Niu, Jingbo
Neogi, Tuhina
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Neogi, Tuhina
Lane, Nancy E.
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Lane, Nancy E.
Hietpas, Jean
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Hietpas, Jean
Curtis, Jeffrey R.
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Curtis, Jeffrey R.
Bradley, Laurence A.
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Bradley, Laurence A.
Torner, James C.
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Torner, James C.
Zhang, Yuqing
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机构:Univ Calif, Davis Med Ctr, Ctr Hlth Aging, Davis Sch Med, Sacramento, CA 95817 USA
机构:
Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Lo-Ciganic, W. -H.
Floden, L.
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Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
POB 210202,Drachman Hall Room B307MM, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Floden, L.
Lee, J. K.
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Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
POB 210202,Drachman Hall Room B211J, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Lee, J. K.
Ashbeck, E. L.
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Univ Arizona, Coll Med, Arthrit Ctr, Tucson, AZ 85719 USA
1501 N Campbell Ave,Room 8303, Tucson, AZ 85724 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Ashbeck, E. L.
Zhou, L.
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Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
POB 210202,Drachman Hall Room B207, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Zhou, L.
Chinthammit, C.
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Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
POB 210202,Drachman Hall Room B207, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Chinthammit, C.
Purdy, A. W.
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Univ Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
POB 210202,Drachman Hall Room B307MM, Tucson, AZ 85719 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
Purdy, A. W.
Kwoh, C. K.
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Univ Arizona, Coll Med, Arthrit Ctr, Tucson, AZ 85719 USA
Univ Arizona, Div Rheumatol, Dept Med, Tucson, AZ 85719 USA
1501 N Campbell Ave,Room 8303, Tucson, AZ 85724 USAUniv Arizona, Coll Pharm, Dept Pharm Practice & Sci, POB 210202,Drachman Hall Room B307E, Tucson, AZ 85719 USA
机构:
Baylor Coll Med, Dept Med, Houston, TX 77030 USA
Med Care Line & Res Care Line, Houston, TX USA
Michael E DeBakey Med Ctr, HSR&D Ctr Innovat Qual Effectiveness & Safety, Houston, TX 77030 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Lo, Grace H.
Ikpeama, Uzoh E.
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Med Care Line & Res Care Line, Houston, TX USA
Michael E DeBakey Med Ctr, HSR&D Ctr Innovat Qual Effectiveness & Safety, Houston, TX 77030 USA
John Peter Smith Hlth Network, Dept Sports Med, Ft Worth, TX USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Ikpeama, Uzoh E.
Driban, Jeffrey B.
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Tufts Med Ctr, Div Rheumatol, Boston, MA 02111 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Driban, Jeffrey B.
Kriska, Andrea M.
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Univ Pittsburgh, Dept Epidemiol, Pittsburgh, PA 15261 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Kriska, Andrea M.
McAlindon, Timothy E.
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Tufts Med Ctr, Div Rheumatol, Boston, MA 02111 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
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Indiana Univ Penn, Dept Kinesiol Hlth & Sport Sci, Indiana, PA 15705 USABaylor Coll Med, Dept Med, Houston, TX 77030 USA
Storti, Kristi L.
Eaton, Charles B.
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Brown Univ, Mem Hosp Rhode Isl, Dept Family Med & Epidemiol, Pawtucket, RI 02860 USA
Brown Univ, Alpert Med Sch, Pawtucket, RI USABaylor Coll Med, Dept Med, Houston, TX 77030 USA