A Group of Long Non-coding RNAs in Blood Acts as a Specific Biomarker of Alzheimer's Disease

被引:3
作者
Ren, Ziye [1 ,2 ]
Chu, Changbiao [1 ,2 ]
Pang, Yana [1 ,2 ]
Cai, Huimin [1 ,2 ]
Jia, Longfei [1 ,2 ]
机构
[1] Capital Med Univ, Innovat Ctr Neurol Disorders, Xuanwu Hosp, Natl Clin Res Ctr Geriatr Dis, 45 Changchun St, Beijing, Peoples R China
[2] Capital Med Univ, Dept Neurol, Xuanwu Hosp, Natl Clin Res Ctr Geriatr Dis, 45 Changchun St, Beijing, Peoples R China
基金
中国国家自然科学基金;
关键词
Alzheimer's disease; Dementia; lncRNA; Biomarker; Diagnosis; DIAGNOSTIC-CRITERIA; DEMENTIA; DISSECTION; GUIDELINES; ALIGNMENT;
D O I
10.1007/s12035-022-03105-w
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Long non-coding RNAs (lncRNAs) have been identified to be involved in the pathogenesis of Alzheimer's disease (AD). In this study, we evaluated whether lncRNAs can be used to discriminate AD patients from controls and patients with other dementias, such as vascular, Parkinson's disease, behavioral variant frontotemporal, and dementia with Lewy body. In this study, we used three datasets to measure the blood lncRNA levels. A pilot study (dataset 1, n = 40; controls, 20; AD, 20) was used to screen for differentially expressed lncRNAs. Dataset 2 (n = 174; controls, 86; AD, 88) was used to identify a lncRNA panel for the diagnostic model. Dataset 3 (n = 333; control, 60; AD, 54; vascular dementia, 53; Parkinson's disease dementia, 55; behavioral variant frontotemporal dementia, 56; and dementia with Lewy body, 55) was used to validate the diagnostic model. In dataset 1, 12 upregulated and 15 downregulated lncRNAs were identified. In dataset 2, a panel of seven lncRNAs was found to have the ability to differentiate AD patients from controls. Finally, this panel was applied to dataset 3 to successfully distinguish AD from other dementias. This study proposes a panel of seven lncRNAs as specific and promising biomarker for AD diagnosis.
引用
收藏
页码:566 / 575
页数:10
相关论文
共 46 条
[1]   LncRNADisease 2.0: an updated database of long non-coding RNA-associated diseases [J].
Bao, Zhenyu ;
Yang, Zhen ;
Huang, Zhou ;
Zhou, Yiran ;
Cui, Qinghua ;
Dong, Dong .
NUCLEIC ACIDS RESEARCH, 2019, 47 (D1) :D1034-D1037
[2]   Discovering chimeric transcripts in paired-end RNA-seq data by using EricScript [J].
Benelli, Matteo ;
Pescucci, Chiara ;
Marseglia, Giuseppina ;
Severgnini, Marco ;
Torricelli, Francesca ;
Magi, Alberto .
BIOINFORMATICS, 2012, 28 (24) :3232-3239
[3]   An intronic ncRNA-dependent regulation of SORL1 expression affecting Aβ formation is upregulated in post-mortem Alzheimer's disease brain samples [J].
Ciarlo, Eleonora ;
Massone, Sara ;
Penna, Ilaria ;
Nizzari, Mario ;
Gigoni, Arianna ;
Dieci, Giorgio ;
Russo, Claudio ;
Florio, Tullio ;
Cancedda, Ranieri ;
Pagano, Aldo .
DISEASE MODELS & MECHANISMS, 2013, 6 (02) :424-433
[4]   Emerging roles of long non-coding RNAs in the pathogenesis of Alzheimer's disease [J].
Cortini, Francesca ;
Roma, Francesca ;
Villa, Chiara .
AGEING RESEARCH REVIEWS, 2019, 50 :19-26
[5]   Recent advances on the role of long non-coding RNAs in Alzheimer's disease [J].
Doxtater, Kyle ;
Tripathi, Manish K. ;
Khan, Mohammad Moshahid .
NEURAL REGENERATION RESEARCH, 2020, 15 (12) :2253-2254
[6]   A clinicopathological approach to the diagnosis of dementia [J].
Elahi, Fanny M. ;
Miller, Bruce L. .
NATURE REVIEWS NEUROLOGY, 2017, 13 (08) :457-476
[7]   Plasma long non-coding RNA BACE1 as a novel biomarker for diagnosis of Alzheimer disease [J].
Feng, Liang ;
Liao, Yu-Ting ;
He, Jin-Cai ;
Xie, Cheng-Long ;
Chen, Si-Yan ;
Fan, Hui-Hui ;
Su, Zhi-Peng ;
Wang, Zhen .
BMC NEUROLOGY, 2018, 18
[8]   Alzheimer's, Parkinson's Disease and Amyotrophic Lateral Sclerosis Gene Expression Patterns Divergence Reveals Different Grade of RNA Metabolism Involvement [J].
Garofalo, Maria ;
Pandini, Cecilia ;
Bordoni, Matteo ;
Pansarasa, Orietta ;
Rey, Federica ;
Costa, Alfredo ;
Minafra, Brigida ;
Diamanti, Luca ;
Zucca, Susanna ;
Carelli, Stephana ;
Cereda, Cristina ;
Gagliardi, Stella .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (24) :1-16
[9]   Parkinson's Disease Dementia: Definitions, Guidelines, and Research Perspectives in Diagnosis [J].
Goetz, Christopher G. ;
Emre, Murat ;
Dubois, Bruno .
ANNALS OF NEUROLOGY, 2008, 64 (06) :S81-S92
[10]   Identification of Key Long Non-Coding RNAs in the Pathology of Alzheimer's Disease and their Functions Based on Genome-Wide Associations Study, Microarray, and RNA-seq Data [J].
Han, Zhijie ;
Xue, Weiwei ;
Tao, Lin ;
Zhu, Feng .
JOURNAL OF ALZHEIMERS DISEASE, 2019, 68 (01) :339-355