Optimization of machine learning classification models for tumor cells based on cell elements heterogeneity with laser-induced breakdown spectroscopy

被引:1
作者
Wang, Yimeng [1 ]
Huang, Da [1 ]
Shu, Kaiqiang [1 ]
Xu, Yingtong [1 ]
Duan, Yixiang [1 ]
Fan, Qingwen [1 ,5 ]
Lin, Qingyu [1 ,5 ]
Tuchin, Valery V. [2 ,3 ,4 ]
机构
[1] Sichuan Univ, Res Ctr Analyt Instrumentat, Sch Mech Engn, Chengdu, Peoples R China
[2] Saratov NG Chernyshevskii State Univ, Inst Phys & Sci Med Ctr, Saratov, Russia
[3] Russian Acad Sci, Inst Precis Mech & Control, Lab Laser Diagnost Tech & Living Syst, FRC Saratov Sci Ctr, Saratov, Russia
[4] Tomsk State Univ, Lab Laser Mol Imaging & Machine Learning, Tomsk, Russia
[5] Sichuan Univ, Res Ctr Analyt Instrumentat, Sch Mech Engn, Chengdu 610064, Peoples R China
基金
俄罗斯科学基金会;
关键词
cancer cell recognition; chemical elements; laser-induced breakdown spectroscopy (LIBS); machine learning; tumor cells; LIBS; COMBINATION; DIAGNOSIS; BACTERIA; MELANOMA;
D O I
10.1002/jbio.202300239
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The rapid and accurate diagnosis of cancer is an important topic in clinical medicine. In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra of cells were first acquired. Then the spectral pre-processing was performed as well as detailed optimization to improve the classification accuracy. After that, the convolutional neural network (CNN), support vector machine (SVM), and K-nearest neighbors were further compared for the optimized classification ability of tumor cells. Both the CNN algorithm and SVM algorithm have achieved impressive discrimination performances for tumor cells distinguishing, with an accuracy of 97.72%. The results show that the heterogeneity of elements in tumor cells plays an important role in distinguishing the cells. It also means that the LIBS technique can be used as a fast classification method for classifying tumor cells.
引用
收藏
页数:8
相关论文
共 50 条
[31]   Comparison of whole blood and serum samples of breast cancer based on laser-induced breakdown spectroscopy with machine learning [J].
Idrees, Bushra Sana ;
Teng, Geer ;
Israr, Ayesha ;
Zaib, Huma ;
Jamil, Yasir ;
Bilal, Muhammad ;
Bashir, Sajid ;
Khan, M. Nouman ;
Wang, Qianqian .
BIOMEDICAL OPTICS EXPRESS, 2023, 14 (06) :2492-2509
[32]   Combination of laser-induced breakdown spectroscopy and Raman spectroscopy for multivariate classification of bacteria [J].
Prochazka, D. ;
Mazura, M. ;
Samek, O. ;
Rebrosova, K. ;
Porizka, P. ;
Klus, J. ;
Prochazkova, P. ;
Novotny, J. ;
Novotny, K. ;
Kaiser, J. .
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY, 2018, 139 :6-12
[33]   Identification and classification of metal copper based on laser-induced breakdown spectroscopy [J].
Han, Boyuan ;
Chen, Ziang ;
Feng, Jun ;
Liu, Yuzhu .
JOURNAL OF LASER APPLICATIONS, 2023, 35 (03)
[34]   Pseudo-shot Learning for Soil Classification With Laser-Induced Breakdown Spectroscopy [J].
Huang Y. ;
Bais A. ;
Hussein A.E. .
IEEE Transactions on Artificial Intelligence, 2024, 5 (02) :709-723
[35]   Fast identification and characterization of residual wastes via laser-induced breakdown spectroscopy and machine learning [J].
Yan, Beibei ;
Liang, Rui ;
Li, Bo ;
Tao, Junyu ;
Chen, Guanyi ;
Cheng, Zhanjun ;
Zhu, Zhifeng ;
Li, Xiaofeng .
RESOURCES CONSERVATION AND RECYCLING, 2021, 174
[36]   A brief review of new data analysis methods of laser-induced breakdown spectroscopy: machine learning [J].
Zhang, Dianxin ;
Zhang, Hong ;
Zhao, Yong ;
Chen, Yongliang ;
Ke, Chuan ;
Xu, Tao ;
He, Yaxiong .
APPLIED SPECTROSCOPY REVIEWS, 2022, 57 (02) :89-111
[37]   Detection and Classification of Bacterial Cells After Centrifugation and Filtration of Liquid Specimens Using Laser-Induced Breakdown Spectroscopy [J].
Blanchette, Emma J. ;
Sleiman, Sydney C. ;
Arain, Haiqa ;
Tieu, Alayna ;
Clement, Chloe L. ;
Howson, Griffin C. ;
Tracey, Emily A. ;
Malik, Hadia ;
Marvin, Jeremy C. ;
Rehse, Steven J. .
APPLIED SPECTROSCOPY, 2022, 76 (08) :894-904
[38]   Rapid quantitative analysis of three elements (Al, Mg and Fe) in molten zinc based on laser-induced breakdown spectroscopy combined with machine learning algorithm [J].
Liu, Yanli ;
Li, Maogang ;
An, Zhiguo ;
Zhang, Tianlong ;
Liu, Jie ;
Liang, Yuanyuan ;
Tang, Hongsheng ;
Gong, Junjie ;
Yan, Dong ;
You, Zenghui ;
Li, Hua .
CHINESE JOURNAL OF ANALYTICAL CHEMISTRY, 2024, 52 (10)
[39]   Rapid identification of fish species by laser-induced breakdown spectroscopy and Raman spectroscopy coupled with machine learning methods [J].
Ren, Lihui ;
Tian, Ye ;
Yang, Xiaoying ;
Wang, Qi ;
Wang, Leshan ;
Geng, Xin ;
Wang, Kaiqiang ;
Du, Zengfeng ;
Li, Ying ;
Lin, Hong .
FOOD CHEMISTRY, 2023, 400
[40]   A Review on Laser-Induced Breakdown Spectroscopy in Different Cancers Diagnosis and Classification [J].
Khan, Muhammad Nouman ;
Wang, Qianqian ;
Idrees, Bushra Sana ;
Xiangli, Wenting ;
Teng, Geer ;
Cui, Xutai ;
Zhao, Zhifang ;
Wei, Kai ;
Abrar, Muhammad .
FRONTIERS IN PHYSICS, 2022, 10