Long-read sequencing (method of the year 2022): The way forward for plant omics research

被引：17

作者：

Sahu, Sunil Kumar ^{[1
]}

Liu, Huan ^{[1
,2
]}

机构：

[1] BGI Shenzhen, State Key Lab Agr Genom, Shenzhen 518083, Peoples R China

[2] Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China

来源：

MOLECULAR PLANT | 2023年 / 16卷 / 05期

关键词：

D O I：

10.1016/j.molp.2023.04.007

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

引用

页码：791 / 793

页数：3

共 15 条

[1] Evolution of the germline mutation rate across vertebrates
Bergeron, Lucie A.
Besenbacher, Soren
Zheng, Jiao
Li, Panyi
Bertelsen, Mads Frost
Quintard, Benoit
Hoffman, Joseph I.
Li, Zhipeng
Leger, Judy St
Shao, Changwei
Stiller, Josefin
Gilbert, M. Thomas P.
Schierup, Mikkel H.
Zhang, Guojie
[J]. NATURE, 2023, 615 (7951) : 285 - +
[2] A telomere-to-telomere gap-free reference genome of watermelon and its mutation library provide important resources for gene discovery and breeding
Deng, Yun
Liu, Shoucheng
Zhang, Yilin
Tan, Jingsheng
Li, Xiaopeng
Chu, Xiao
Xu, Binghua
Tian, Yao
Sun, Yudong
Li, Bosheng
Xu, Yunbi
Deng, Xing Wang
He, Hang
Zhang, Xingping
[J]. MOLECULAR PLANT, 2022, 15 (08) : 1268 - 1284
[3] Era of gapless plant genomes: innovations in sequencing and mapping technologies revolutionize genomics and breeding
Gladman, Nicholas
Goodwin, Sara
Chougule, Kapeel
McCombie, William Richard
Ware, Doreen
[J]. CURRENT OPINION IN BIOTECHNOLOGY, 2023, 79
[4] How do emerging long-read sequencing technologies function in transforming the plant pathology research landscape?
Hamim, Islam
Sekine, Ken-Taro
Komatsu, Ken
[J]. PLANT MOLECULAR BIOLOGY, 2022, 110 (06) : 469 - 484
[5] Two haplotype-resolved, gap-free genome assemblies for Actinidia latifolia and Actinidia chinensis shed light on the regulatory mechanisms of vitamin C and sucrose metabolism in kiwifruit
Han, Xue
Zhang, Yilin
Zhang, Qiong
Ma, Ni
Liu, Xiaoying
Tao, Wenjing
Lou, Zhiying
Zhong, Caihong
Deng, Xing Wang
Li, Dawei
He, Hang
[J]. MOLECULAR PLANT, 2023, 16 (02) : 452 - 470
[6] A near-complete assembly of an Arabidopsis thaliana genome
Hou, Xueren
Wang, Depeng
Cheng, Zhukuan
Wang, Ying
Jiao, Yuling
[J]. MOLECULAR PLANT, 2022, 15 (08) : 1247 - 1250
[7] The giant diploid faba genome unlocks variation in a global protein crop
Jayakodi, Murukarthick
Golicz, Agnieszka A.
Kreplak, Jonathan
Fechete, Lavinia, I
Angra, Deepti
Bednar, Petr
Bornhofen, Elesandro
Zhang, Hailin
Boussageon, Raphael
Kaur, Sukhjiwan
Cheung, Kwok
Cizkova, Jana
Gundlach, Heidrun
Hallab, Asis
Imbert, Baptiste
Keeble-Gagnere, Gabriel
Koblizkova, Andrea
Kobrlova, Lucie
Krejci, Petra
Mouritzen, Troels W.
Neumann, Pavel
Nadzieja, Marcin
Nielsen, Linda Kaergaard
Novak, Petr
Orabi, Jihad
Padmarasu, Sudharsan
Robertson-Shersby-Harvie, Tom
Robledillo, Laura Avila
Schiemann, Andrea
Tanskanen, Jaakko
Toronen, Petri
Warsame, Ahmed O.
Wittenberg, Alexander H. J.
Himmelbach, Axel
Aubert, Gregoire
Courty, Pierre-Emmanuel
Dolezel, Jaroslav
Holm, Liisa U.
Janss, Luc L.
Khazaei, Hamid
Macas, Jiri
Mascher, Martin
Smykal, Petr
Snowdon, Rod J.
Stein, Nils
Stoddard, Frederick L.
Stougaard, Jens
Tayeh, Nadim
Torres, Ana M.
Usadel, Bjorn
[J]. NATURE, 2023, 615 (7953) : 652 - +
[8] Approaching complete genomes, transcriptomes and epi-omes with accurate long-read sequencing
Kovaka, Sam
Ou, Shujun
Jenike, Katharine M.
Schatz, Michael C.
[J]. NATURE METHODS, 2023, 20 (01) : 12 - 16
[9] Long-read sequencing reveals genomic structural variations that underlie creation of quality protein maize
Li, Changsheng
Xiang, Xiaoli
Huang, Yongcai
Zhou, Yong
An, Dong
Dong, Jiaqiang
Zhao, Chenxi
Liu, Hongjun
Li, Yubin
Wang, Qiong
Du, Chunguang
Messing, Joachim
Larkins, Brian A.
Wu, Yongrui
Wang, Wenqin
[J]. NATURE COMMUNICATIONS, 2020, 11 (01)
[10] Method of the year: long-read sequencing
Marx, Vivien
[J]. NATURE METHODS, 2023, 20 (01) : 6 - 11

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