Structural elucidation of 1:4:4 stochiometric form of thymine-gallic acid cocrystal hydrate: Hirshfeld surface analysis, 3D energy framework, DFT calculations, and SARS CoV-2 docking studies

被引:11
作者
Jyothi, K. L. [1 ,2 ]
Hema, M. K.
Kumara, Karthik [3 ]
Row, T. N. Guru [4 ]
Lokanath, N. K. [1 ]
机构
[1] Univ Mysore, Dept Studies Phys, Mysuru 570006, India
[2] Govt First Grade Coll & PG Ctr, Dept PG Phys, Chintamani 563125, India
[3] B M S Coll Engn, Dept Phys, Bengaluru 560019, India
[4] Indian Inst Sci, Solid State & Struct Chem Unit, Bengaluru 560012, India
关键词
Thymine-gallic acid cocrystal; Stoichiometry; Supramolecular motifs; 3D energy framework; SARS CoV-2; INTERMOLECULAR INTERACTIONS; X-RAY; CRYSTAL-STRUCTURE; ACCURACY; NEAT;
D O I
10.1016/j.molstruc.2023.135072
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Physical and chemical property enhancement of an active pharmaceutical ingredient through a multi -component form is an integral part of the pharmaceutical research. A novel binary compound of thymine (TY) with gallic acid (GA) has been obtained by a solid-state grinding process and preliminarily charac-terized by FTIR technique. The single crystals were obtained and the 3D molecular crystal structure was confirmed by X-ray diffraction studies. The novel binary compound was crystallized as a cocrystal hydrate [TY-GA-H2O] in the monoclinic P21/c space group with an 1:4:4 stoichiometry. Crystal structure analysis revealed the presence of both intra and intermolecular hydrogen bond interactions, which resulted in the formation of various supramolecular architectures. Further, the structural analysis explored the presence of lone pair- & pi; and & pi;...& pi; interactions apart from the conventional hydrogen bond interactions. Further-more, the Hirshfeld surface analysis was carried out to quantify the contribution of hydrogen bond in-teractions in stabilizing the crystal structure. The individual interaction energies and the total interaction energy between the molecules were computed through energy framework analysis. HOMO-LUMO plots and MEP surface were generated to understand the electronic structure and chemical reactive sites of the molecule respectively. Finally, the molecular docking analysis was carried out to examine the antiviral properties of the novel TY-GA cocrystal hydrate. & COPY; 2023 Elsevier B.V. All rights reserved.
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页数:15
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