DNA MOLECULE;
DYNAMICS;
PARTICLES;
TRANSPORT;
PRESSURE;
TRAP;
D O I:
10.1021/acs.biomac.3c00473
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Solid-state nanopore sensors remain a promising solutionto therising global demand for genome sequencing. These single-moleculesensing technologies require single-file translocation for high resolutionand accurate detection. In a previous publication, we discovered ahairpin unraveling mechanism, namely, the pulley effect, in a pressure-driventranslocation system. In this paper, we further investigate the pulleyeffect in the presence of pressure-driven fluid flow and an opposingforce provided by an electrostatic field as an approach to increasesingle-file capture probability. A hydrodynamic flow is used to movethe polymer forward, and two oppositely charged electrostatic squareloops are used to create an opposing force. By optimizing the balancebetween forces, we show that the single-file capture can be amplifiedfrom about 50% to almost 95%. The force location, force strength,and flow rate are used as the optimizing variables.
机构:
Univ Western Ontario, Dept Appl Math, London, ON, CanadaUniv Western Ontario, Dept Appl Math, London, ON, Canada
Afrasiabian, Navid
Denniston, Colin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Western Ontario, Dept Appl Math, London, ON, Canada
Univ Western Ontario, Dept Phys & Astron, London, ON, CanadaUniv Western Ontario, Dept Appl Math, London, ON, Canada
机构:
Alexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Asandei, Alina
Schiopu, Irina
论文数: 0引用数: 0
h-index: 0
机构:
Alexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Schiopu, Irina
Chinappi, Mauro
论文数: 0引用数: 0
h-index: 0
机构:
Ist Italiano Tecnol, Ctr Life Nano Sci Sapienza, Viale Regina Elena 291, I-00161 Rome, ItalyAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Chinappi, Mauro
Seo, Chang Ho
论文数: 0引用数: 0
h-index: 0
机构:
Kongju Natl Univ, Dept Bioinformat, Kong Ju 314701, South KoreaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Seo, Chang Ho
Park, Yoonkyung
论文数: 0引用数: 0
h-index: 0
机构:
Chosun Univ, Dept Biomed Sci, Gwangju 61452, South Korea
Chosun Univ, Res Ctr Prot Mat, Gwangju 61452, South KoreaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Park, Yoonkyung
Luchian, Tudor
论文数: 0引用数: 0
h-index: 0
机构:
Alexandru I Cuza Univ, Dept Phys, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
机构:
Ecole Polytech Fed Lausanne, Sch Life Sci, Inst Bioengn, CH-1015 Lausanne, Switzerland
Univ Fed Rio de Janeiro, Dept Pharmaceut Biotechnol, BR-21941902 Rio De Janeiro, BrazilEcole Polytech Fed Lausanne, Sch Life Sci, Inst Bioengn, CH-1015 Lausanne, Switzerland
机构:
Univ Western Ontario, Dept Appl Math, London, ON, CanadaUniv Western Ontario, Dept Appl Math, London, ON, Canada
Afrasiabian, Navid
Denniston, Colin
论文数: 0引用数: 0
h-index: 0
机构:
Univ Western Ontario, Dept Appl Math, London, ON, Canada
Univ Western Ontario, Dept Phys & Astron, London, ON, CanadaUniv Western Ontario, Dept Appl Math, London, ON, Canada
机构:
Alexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Asandei, Alina
Schiopu, Irina
论文数: 0引用数: 0
h-index: 0
机构:
Alexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Schiopu, Irina
Chinappi, Mauro
论文数: 0引用数: 0
h-index: 0
机构:
Ist Italiano Tecnol, Ctr Life Nano Sci Sapienza, Viale Regina Elena 291, I-00161 Rome, ItalyAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Chinappi, Mauro
Seo, Chang Ho
论文数: 0引用数: 0
h-index: 0
机构:
Kongju Natl Univ, Dept Bioinformat, Kong Ju 314701, South KoreaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Seo, Chang Ho
Park, Yoonkyung
论文数: 0引用数: 0
h-index: 0
机构:
Chosun Univ, Dept Biomed Sci, Gwangju 61452, South Korea
Chosun Univ, Res Ctr Prot Mat, Gwangju 61452, South KoreaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
Park, Yoonkyung
Luchian, Tudor
论文数: 0引用数: 0
h-index: 0
机构:
Alexandru I Cuza Univ, Dept Phys, Iasi 700506, RomaniaAlexandru I Cuza Univ, Dept Interdisciplinary Res, Iasi 700506, Romania
机构:
Ecole Polytech Fed Lausanne, Sch Life Sci, Inst Bioengn, CH-1015 Lausanne, Switzerland
Univ Fed Rio de Janeiro, Dept Pharmaceut Biotechnol, BR-21941902 Rio De Janeiro, BrazilEcole Polytech Fed Lausanne, Sch Life Sci, Inst Bioengn, CH-1015 Lausanne, Switzerland