An artificial intelligence-based model for cell killing prediction: development, validation and explainability analysis of the ANAKIN model

被引:8
|
作者
Cordoni, Francesco G. [1 ,2 ]
Missiaggia, Marta [2 ,3 ]
Scifoni, Emanuele [2 ]
La Tessa, Chiara [2 ,3 ,4 ]
机构
[1] Dept Civil Environm & Mech Engn, Via Mesiano 77, I-38123 Trento, Italy
[2] Trento Inst Fundamental Phys & Applicat TIFPA, Via Sommar 15, I-38123 Trento, Italy
[3] Univ Miami, Dept Radiat Oncol, Miller Sch Med, Miami, FL 33136 USA
[4] Dept Phys, Via Sommar 14, I-38123 Trento, Italy
来源
PHYSICS IN MEDICINE AND BIOLOGY | 2023年 / 68卷 / 08期
关键词
cell survival prediction; radiobiological modelling; RBE model; machine learning; deep learning; RELATIVE BIOLOGICAL EFFECTIVENESS; MICRODOSIMETRIC KINETIC-MODEL; EFFECTIVENESS RBE VALUES; ION-BEAM THERAPY; PROTON THERAPY; IN-VITRO; SURVIVAL; RADIATION; FORMULATION;
D O I
10.1088/1361-6560/acc71e
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
The present work develops ANAKIN: an Artificial iNtelligence bAsed model for (radiation-induced) cell KIlliNg prediction. ANAKIN is trained and tested over 513 cell survival experiments with different types of radiation contained in the publicly available PIDE database. We show how ANAKIN accurately predicts several relevant biological endpoints over a wide broad range on ion beams and for a high number of cell-lines. We compare the prediction of ANAKIN to the only two radiobiological models for Relative Biological Effectiveness prediction used in clinics, that is the Microdosimetric Kinetic Model and the Local Effect Model (LEM version III), showing how ANAKIN has higher accuracy over the all considered cell survival fractions. At last, via modern techniques of Explainable Artificial Intelligence (XAI), we show how ANAKIN predictions can be understood and explained, highlighting how ANAKIN is in fact able to reproduce relevant well-known biological patterns, such as the overkilling effect.
引用
收藏
页数:24
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