Canonical BAF complex activity shapes the enhancer landscape that licenses CD8+T cell effector and memory fates

被引:21
作者
McDonald, Bryan [1 ,3 ]
Chick, Brent Y. [2 ,4 ]
Ahmed, Nasiha S. [2 ]
Burns, Mannix [2 ]
Ma, Shixin
Casillas, Eduardo [1 ]
Chen, Dan [1 ]
Mann, Thomas H. [1 ]
O'Connor, Carolyn [5 ]
Hah, Nasun [6 ]
Hargreaves, Diana C. [2 ]
Kaech, Susan M. [1 ]
机构
[1] Salk Inst Biol Studies, NOMIS Ctr Immunobiol & Microbial Pathogenesis, La Jolla, CA 92037 USA
[2] Salk Inst Biol Studies, Mol & Cell Biol Lab, La Jolla, CA 92037 USA
[3] Univ Calif San Diego, Biomed Sci Grad Program, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Biol Sci Grad Program, La Jolla, CA 92093 USA
[5] Salk Inst Biol Studies, Flow Cytometry Core, La Jolla, CA USA
[6] Salk Inst Biol Studies, Chapman Charitable Fdn Genom Sequencing Core, La Jolla, CA USA
关键词
T-CELLS; TERMINAL DIFFERENTIATION; TRANSCRIPTION FACTORS; CD8(+) EFFECTOR; CHROMATIN; BET; EXPRESSION; RECEPTOR; PROGRAM; GENOME;
D O I
10.1016/j.immuni.2023.05.005
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
CD8+ T cells provide host protection against pathogens by differentiating into distinct effector and memory cell subsets, but how chromatin is site-specifically remodeled during their differentiation is unclear. Due to its critical role in regulating chromatin and enhancer accessibility through its nucleosome remodeling activities, we investigated the role of the canonical BAF (cBAF) chromatin remodeling complex in antiviral CD8+ T cells during infection. ARID1A, a subunit of cBAF, was recruited early after activation and established de novo open chromatin regions (OCRs) at enhancers. Arid1a deficiency impaired the opening of thousands of acti-vation-induced enhancers, leading to loss of TF binding, dysregulated proliferation and gene expression, and failure to undergo terminal effector differentiation. Although Arid1a was dispensable for circulating memory cell formation, tissue-resident memory (Trm) formation was strongly impaired. Thus, cBAF governs the enhancer landscape of activated CD8+ T cells that orchestrates TF recruitment and activity and the acquisi-tion of specific effector and memory differentiation states.
引用
收藏
页码:1303 / +
页数:23
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