Elucidating structure and dynamics of glutathione S-transferase from Rhipicephalus (Boophilus) microplus

被引:2
作者
Rangubpit, Warin [1 ,2 ]
Suwan, Eukote [1 ]
Sangthong, Danai [1 ]
Wongpanit, Kannika [4 ]
Stich, Roger W. [5 ]
Pongprayoon, Prapasiri [2 ,3 ]
Jittapalapong, Sathaporn [1 ]
机构
[1] Kasetsart Univ, Fac Vet Technol, Dept Vet Technol, Bangkok, Thailand
[2] Kasetsart Univ, Dept Chem, Fac Sci, Bangkok, Thailand
[3] Kasetsart Univ, KU Inst Adv Studies, Ctr Adv Studies Nanotechnol Chem Food & Agr Ind, Bangkok, Thailand
[4] Kasetsart Univ, Fac Nat Resources & Agroind, Dept Agr & Resources, Chalermphrakiat Sakon Nakhon Prov Campus, Sakon Nakhon, Thailand
[5] Univ Missouri, Dept Vet Pathobiol, Columbia, MO USA
关键词
Tick; Glutathione S-transferase; MD simulation; Rhipicephalus (Boophilus) microplus; ACARICIDE RESISTANCE MECHANISMS; INSECTICIDE RESISTANCE; MOLECULAR-DYNAMICS; DIMER INTERFACE; KEY MOTIF; MU-CLASS; HELIX; LOCK; TICK; P1-1;
D O I
10.1080/07391102.2022.2120079
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Rhipicephalus (Boophilus) microplus is tick parasite that affects the cattle industry worldwide. In R. (B.) microplus, acaricide resistance develops rapidly against many commercial acaricides. One of main resistance strategies is to enhance the metabolic detoxification mediated by R. (B.) microplus glutathione-S-transferase (RmGST). RmGST detoxifies acaricides by catalyzing the conjugation of glutathione to acaricides. Although structural and dynamic details of RmGST are expected to elucidate the biologic activity of this molecule, these data have not been available to date. Thus, Molecular Dynamics simulations were employed to study ligand-free RmGST at an atomic level. Like other m-class GSTs, the flexible m loop (m1) of RmGST was observed. M1 seems to shield the active sites from the bulk. A RmGST dimer is stabilized by the lock-and-key motif (F57 as "key") and hydrogen bonds of R82-E91 and R82-D98 at the dimer interface. Without substrates, conserved catalytic Y116 and N209 can interact with V112, G210 (for Y116) and F215 (for N209). Overall, most residues involving in RmGST function and stability are similar to other m-class GSTs. This implies similar structural stability and catalytic activity of RmGST to other GSTs. An insight obtained here will be useful for management of acaricide resistance and tick control. Communicated by Ramaswamy H. Sarma
引用
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页码:7309 / 7317
页数:9
相关论文
共 63 条
[1]   SNPs and other polymorhisms associated with acaricide resistance in Rhipicephalus microplus [J].
Aguilar, Gabriela ;
Olvera, Andrea M. ;
Carvajal, Bertha I. ;
Mosqueda, Juan .
FRONTIERS IN BIOSCIENCE-LANDMARK, 2018, 23 :65-82
[2]   The intersubunit lock-and-key motif in human glutathione transferase A1-1:: role of the key residues Met51 and Phe52 in function and dimer stability [J].
Alves, CS ;
Kuhnert, DC ;
Sayed, Y ;
Dirr, HW .
BIOCHEMICAL JOURNAL, 2006, 393 :523-528
[3]   Insights into the catalytic mechanism of glutathione S-transferase the lesson from Schistosoma haematobium [J].
Angelucci, F ;
Baiocco, P ;
Brunori, M ;
Gourlay, L ;
Morea, V ;
Bellelli, A .
STRUCTURE, 2005, 13 (09) :1241-1246
[4]   GLUTATHIONE S-TRANSFERASES - REACTION-MECHANISM, STRUCTURE, AND FUNCTION [J].
ARMSTRONG, RN .
CHEMICAL RESEARCH IN TOXICOLOGY, 1991, 4 (02) :131-140
[5]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[6]   SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information [J].
Biasini, Marco ;
Bienert, Stefan ;
Waterhouse, Andrew ;
Arnold, Konstantin ;
Studer, Gabriel ;
Schmidt, Tobias ;
Kiefer, Florian ;
Cassarino, Tiziano Gallo ;
Bertoni, Martino ;
Bordoli, Lorenza ;
Schwede, Torsten .
NUCLEIC ACIDS RESEARCH, 2014, 42 (W1) :W252-W258
[7]   Additive Protection by Antioxidant and Apoptosis-Inhibiting Effects on Mosquito Cells with Dengue 2 Virus Infection [J].
Chen, Tien-Huang ;
Lo, Yin-Ping ;
Yang, Chao-Fu ;
Chen, Wei-June .
PLOS NEGLECTED TROPICAL DISEASES, 2012, 6 (04)
[8]   Accumulation of acaricide resistance mechanisms in Rhipicephalus (Boophilus) microplus (Acari: Ixodidae) populations from New Caledonia Island [J].
Chevillon, Christine ;
Ducornez, Sophie ;
de Meeus, Thierry ;
Koffi, Brou Basile ;
Gaia, Huguette ;
Delathiere, Jean-Michel ;
Barre, Nicolas .
VETERINARY PARASITOLOGY, 2007, 147 (3-4) :276-288
[9]   Influence of the dimer interface on glutathione transferase structure and dynamics revealed by amide H/D exchange mass spectrometry [J].
Codreanu, SG ;
Thompson, LC ;
Hachey, DL ;
Dirr, HW ;
Armstrong, RN .
BIOCHEMISTRY, 2005, 44 (31) :10605-10612
[10]   A single P450 allele associated with insecticide resistance in Drosophila [J].
Daborn, PJ ;
Yen, JL ;
Bogwitz, MR ;
Le Goff, G ;
Feil, E ;
Jeffers, S ;
Tijet, N ;
Perry, T ;
Heckel, D ;
Batterham, P ;
Feyereisen, R ;
Wilson, TG ;
ffrench-Constant, RH .
SCIENCE, 2002, 297 (5590) :2253-2256