The Great Gobi A Strictly Protected Area: Characterization of Soil Bacterial Communities from Four Oases

被引:2
作者
Esposito, Antonia [1 ,2 ]
Del Duca, Sara [1 ]
Vitali, Francesco [1 ]
Bigiotti, Gaia [1 ]
Mocali, Stefano [1 ]
Semenzato, Giulia [2 ]
Papini, Alessio [2 ]
Santini, Giacomo [2 ]
Mucci, Nadia [3 ]
Padula, Anna [3 ]
Greco, Claudia [3 ]
Nasanbat, Battogtokh [4 ]
Davaakhuu, Gantulga [4 ]
Bazarragchaa, Munkhtsetseg [5 ]
Riga, Francesco [6 ]
Augugliaro, Claudio [7 ]
Cecchi, Lorenzo [8 ]
Fani, Renato [2 ]
Zaccaroni, Marco [2 ]
机构
[1] Council Agr Res & Econ, Res Ctr Agr & Environm, I-50125 Florence, Italy
[2] Univ Florence, Dept Biol, Via Madonna Piano 6, I-50019 Florence, Italy
[3] Inst Environm Protect & Res, Unit Conservat Genet BIO CGE, Via Ca Fornacetta 9, I-40064 Ozzano Dellemilia, Bologna, Italy
[4] Mongolian Acad Sci, Inst Biol, Peace Ave 54B, Ulaanbaatar 13330, Mongolia
[5] Mongolian Natl Univ Med Sci, Sch Biomed, Dept Mol Biol & Genet, Ulaanbaatar 14210, Mongolia
[6] Italian Inst Environm Protect & Res ISPRA, Via Brancati 48, I-00144 Rome, Italy
[7] Wildlife Initiat, Ulaanbaatar 210349, Mongolia
[8] Nat Hist Museum, Bot Collect Filippo Parlatore, Via Giorgio Pira 4, I-50121 Florence, Italy
关键词
soil desert; soil microorganisms; bacterial communities; microbiome; SP NOV; DESERT; DIVERSITY; BIODIVERSITY; SET;
D O I
10.3390/microorganisms12020320
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Understanding how microbial communities survive in extreme environmental pressure is critical for interpreting ecological patterns and microbial diversity. Great Gobi A Strictly Protected Area represents an intriguing model for studying the bacterial community since it is a protected and intact wild area of the Mongolian desert. In this work, the composition of a bacterial community of the soil from four oases was characterized by extracting total DNA and sequencing through the Illumina NovaSeq platform. In addition, the soil's chemical and physical properties were determined, and their influence on shaping the microbial communities was evaluated. The results showed a high variability of bacterial composition among oases. Moreover, combining specific chemical and physical parameters significantly shapes the bacterial community among oases. Data obtained suggested that the oases were highly variable in physiochemical parameters and bacterial communities despite the similar extreme climate conditions. Moreover, core functional microbiome were constituted by aerobic chemoheterotrophy and chemoheterotrophy, mainly contributed by the most abundant bacteria, such as Actinobacteriota, Pseudomonadota, and Firmicutes. This result supposes a metabolic flexibility for sustaining life in deserts. Furthermore, as the inhabitants of the extreme regions are likely to produce new chemical compounds, isolation of key taxa is thus encouraged.
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页数:16
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共 55 条
[1]   Thermophilic bacteria in Moroccan hot springs, salt marshes and desert soils [J].
Aanniz, Tarik ;
Ouadghiri, Mouna ;
Melloul, Marouane ;
Swings, Jean ;
Elfahime, Elmostafa ;
Ibijbijen, Jamal ;
Ismaili, Mohamed ;
Amar, Mohamed .
BRAZILIAN JOURNAL OF MICROBIOLOGY, 2015, 46 (02) :443-453
[2]   Phosphate solubilizing bacteria and fungi in desert soils: species, limitations and mechanisms [J].
Ameen, Fuad ;
AlYahya, Sami A. ;
AlNadhari, Saleh ;
Alasmari, Hadi ;
Alhoshani, Fahad ;
Wainwright, Milton .
ARCHIVES OF AGRONOMY AND SOIL SCIENCE, 2019, 65 (10) :1446-1459
[3]  
Amond J.B., 2019, Model Ecosystems in Extreme Environments, P113
[4]   Bacterial Diversity of Surface Sand Samples from the Gobi and Taklamaken Deserts [J].
An, Shu ;
Couteau, Cecile ;
Luo, Fan ;
Neveu, Julie ;
DuBow, Michael S. .
MICROBIAL ECOLOGY, 2013, 66 (04) :850-860
[5]   Soil particle-size analysis up to 250μm by X-ray granulometer: Device set-up and regressions for data conversion into pipette-equivalent values [J].
Andrenelli, M. ;
Fiori, V. ;
Pellegrini, S. .
GEODERMA, 2013, 192 :380-393
[6]  
[Anonymous], 2000, Angeli F Minist. Politiche Agric. E For. Oss. Naz. Pedol. Qual. Suolo
[7]   Microvirga lupini sp nov., Microvirga lotononidis sp nov and Microvirga zambiensis sp nov are alphaproteobacterial root-nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts [J].
Ardley, Julie K. ;
Parker, Matthew A. ;
De Meyer, Sofie E. ;
Trengove, Robert D. ;
O'Hara, Graham W. ;
Reeve, Wayne G. ;
Yates, Ron J. ;
Dilworth, Michael J. ;
Willems, Anne ;
Howieson, John G. .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 :2579-2588
[8]   Flora of Mongolia: annotated checklist of native vascular plants [J].
Baasanmunkh, Shukherdorj ;
Urgamal, Magsar ;
Oyuntsetseg, Batlai ;
Sukhorukov, Alexander P. ;
Tsegmed, Zagarjav ;
Son, Dong Chan ;
Erst, Andrey ;
Oyundelger, Khurelpurev ;
Kechaykin, Alexey A. ;
Norris, Joscelyn ;
Kosachev, Petr ;
Ma, Jin-Shuang ;
Chang, Kae Sun ;
Choi, Hyeok Jae .
PHYTOKEYS, 2022, (192) :63-169
[9]   Seasonal and spatial variability in total and active bacterial communities from desert soil [J].
Baubin, C. ;
Farrell, A. M. ;
Stovicek, A. ;
Ghazaryan, L. ;
Giladi, I ;
Gillor, O. .
PEDOBIOLOGIA, 2019, 74 :7-14
[10]  
Callahan BJ, 2016, NAT METHODS, V13, P581, DOI [10.1038/nmeth.3869, 10.1038/NMETH.3869]