An Immunoinformatics Approach to Design Novel and Potent Multi-Epitope-Based Vaccine to Target Lumpy Skin Disease

被引:9
作者
Shahab, Muhammad [1 ]
Alzahrani, A. Khuzaim [2 ]
Duan, Xiuyuan [1 ]
Aslam, Muneeba [3 ]
Abida [4 ]
Imran, Mohd. [4 ]
Kamal, Mehnaz [5 ]
Alam, Md. Tauquir [4 ]
Zheng, Guojun [1 ]
机构
[1] Beijing Univ Chem Technol, State Key Labs Chem Resources Engn, Beijing 100029, Peoples R China
[2] Northern Border Univ, Fac Appl Med Sci, Med Lab Technol, Ar Ar 91431, Saudi Arabia
[3] Abdul Wali Khan Univ, Dept Biochem, Mardan 23200, Pakistan
[4] Northern Border Univ, Fac Pharm, Dept Pharmaceut Chem, Rafha 91911, Saudi Arabia
[5] Prince Sattam Bin Abdulaziz Univ, Coll Pharm, Dept Pharmaceut Chem, Al Kharj 11942, Saudi Arabia
关键词
LSD; multi-epitope vaccine; immunoinformatics approach; molecular docking; MD simulation; VIRUS; PROTEINS; WEB;
D O I
10.3390/biomedicines11020398
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The lumpy skin disease (LSD) virus of the Poxviridae family is a serious threat that mostly affects cattle and causes significant economic loss. LSD has the potential to spread widely and its rapidly across borders. Despite the availability of information, there is still no competitive vaccine available for LSD. Therefore, the current study was conducted to develop an epitope-based LSD vaccine that is efficient, secure, and biocompatible and stimulates both innate and adaptive immune responses using immunoinformatics techniques. Initially, putative virion core proteins were manipulated; B-cell and T-cell epitopes have been predicted and connected with the help of adjuvants and linkers. Numerous bioinformatics methods, including antigenicity testing, transmembrane topology screening, allergenicity assessment, conservancy analysis, and toxicity evaluation, were employed to find superior epitopes. Based on promising vaccine candidates and immunogenic potential, the vaccine design was selected. Strong interactions between TLR4 and TLR9 and the anticipated vaccine design were revealed by molecular docking. Finally, based on the high docking score, computer simulations were performed in order to assess the stability, efficacy, and compactness of the constructed vaccine. The simulation outcomes showed that the polypeptide vaccine design was remarkably stable, with high expression, stability, immunogenic qualities, and considerable solubility. Additionally, computer-based research shows that the constructed vaccine provides adequate population coverage, making it a promising candidate for use in the design of vaccines against other viruses within the Poxviridae family and potentially other virus families as well. These outcomes suggest that the epitope-based vaccine developed in this study will be a significant candidate against LSD to control and prevent LSDV-related disorders if further investigated experimentally.
引用
收藏
页数:18
相关论文
共 47 条
  • [1] Multi-Epitope-Based Vaccine Candidate for Monkeypox: An In Silico Approach
    Abdi, Sayed Aliul Hasan
    Ali, Amena
    Sayed, Shabihul Fatma
    Abutahir
    Ali, Abuzer
    Alam, Prawez
    [J]. VACCINES, 2022, 10 (09)
  • [2] Abdulqa H.Y., 2016, Reprod. Immunol. Open Acc., V1, P25, DOI [10.21767/2476-1974.100025, DOI 10.21767/2476-1974.100025]
  • [3] Immunoinformatics approach to epitope-based vaccine design against the SARS-CoV-2 in Bangladeshi patients
    Akter, Shahina
    Shahab, Muhammad
    Sarkar, Md Murshed Hasan
    Hayat, Chandni
    Banu, Tanjina Akhtar
    Goswami, Barna
    Jahan, Iffat
    Osman, Eshrar
    Uzzaman, Mohammad Samir
    Habib, Md Ahashan
    Shaikh, Aftab Ali
    Khan, Md Salim
    [J]. JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY, 2022, 20 (01)
  • [4] A Glance at the Development and Patent Literature of Tecovirimat: The First-in-Class Therapy for Emerging Monkeypox Outbreak
    Almehmadi, Mazen
    Allahyani, Mamdouh
    Alsaiari, Ahad Amer
    Alshammari, Mohammed Kanan
    Alharbi, Abrar Saleh
    Hussain, Khansa Hamza
    Alsubaihi, Lojain Ibrahim
    Kamal, Mehnaz
    Alotaibi, Shahad Saleh
    Alotaibi, Atheer Nasser
    Aldhafeeri, Afeefah Awaid
    Imran, Mohd
    [J]. VIRUSES-BASEL, 2022, 14 (09):
  • [5] Vaccinomic approach for novel multi epitopes vaccine against severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2)
    Almofti, Yassir A.
    Abd-elrahman, Khoubieb Ali
    Eltilib, Elsideeq E. M.
    [J]. BMC IMMUNOLOGY, 2021, 22 (01)
  • [6] Angelova T., 2018, Macedonian Journal of Animal Science, V8, P89
  • [7] In-silico design of envelope based multi-epitope vaccine candidate against Kyasanur forest disease virus
    Arumugam, Sathishkumar
    Varamballi, Prasad
    [J]. SCIENTIFIC REPORTS, 2021, 11 (01)
  • [8] Potential druggable proteins and chimeric vaccine construct prioritization against Brucella melitensis from species core genome data
    Aslam, Muneeba
    Shehroz, Muhammad
    Hizbullah
    Shah, Mohibullah
    Khan, Munazza Ali
    Afridi, Sahib Gul
    Khan, Asifullah
    [J]. GENOMICS, 2020, 112 (02) : 1734 - 1745
  • [9] Molecular characterization of lumpy skin disease virus (LSDV) emerged in Bangladesh reveals unique genetic features compared to contemporary field strains
    Badhy, Shukes Chandra
    Chowdhury, Mohammad Golam Azam
    Settypalli, Tirumala Bharani Kumar
    Cattoli, Giovanni
    Lamien, Charles Euloge
    Fakir, Mohammad Aflak Uddin
    Akter, Shamima
    Osmani, Mozaffar Goni
    Talukdar, Faisol
    Begum, Noorjahan
    Khan, Izhar Ahmed
    Rashid, Md Bazlur
    Sadekuzzaman, Mohammad
    [J]. BMC VETERINARY RESEARCH, 2021, 17 (01)
  • [10] The current status of sheep pox disease
    Bhanuprakash, V
    Indrani, BK
    Hosamani, M
    Singh, RK
    [J]. COMPARATIVE IMMUNOLOGY MICROBIOLOGY AND INFECTIOUS DISEASES, 2006, 29 (01) : 27 - 60