Metal Ions Can Modulate the Self-Assembly and Activity of Catalytic Peptide Amyloids

被引:3
作者
Duran-Meza, Eva [1 ,2 ]
Araya-Secchi, Raul [3 ,4 ]
Romero-Hasler, Patricio [5 ]
Soto-Bustamante, Eduardo Arturo [6 ]
Castro-Fernandez, Victor [2 ]
Castillo-Caceres, Claudio [1 ]
Monasterio, Octavio [2 ]
Diaz-Espinoza, Rodrigo [1 ]
机构
[1] Univ Santiago de Chile, Fac Quim & Biol, Dept Biol, Santiago 9170390, Chile
[2] Univ Chile, Fac Ciencias, Dept Biol, Santiago 7800003, Chile
[3] Univ San Sebastian, Fac Ingn Tecnol & Diseno, Computat Biophys Grp, Santiago 8420524, Chile
[4] Univ San Sebastian, Ctr Basal Ciencia & Vida, Santiago 8580000, Chile
[5] Univ Chile, Fac Ciencias Quim & Farmaceut, Dept Ciencia Alimentos & Tecnol Quim, Santiago 81380494, Chile
[6] Univ Chile, Fac Ciencias Quim & Farmaceut, Dept Quim Organ & Fisicoquim, Santiago, Chile
关键词
ATOMIC-RESOLUTION STRUCTURE; CARBONIC-ANHYDRASE; ZINC-BINDING; FORCE-FIELD; HISTIDINE; FIBRIL; SITE; COORDINATION; DYNAMICS; COPPER;
D O I
10.1021/acs.langmuir.3c02983
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Rational design of peptides has become a powerful tool to produce self-assembled nanostructures with the ability to catalyze different chemical reactions, paving the way to develop minimalistic enzyme-like nanomaterials. Catalytic amyloid-like assemblies have emerged among the most versatile and active, but they often require additional factors for activity. Elucidating how these factors influence the structure and activity is key for the design. Here, we showed that biologically relevant metal ions can guide and modulate the self-assembly of a small peptide into diverse amyloid architectures. The morphology and catalytic activity of the resulting fibrils were tuned by the specific metal ion decorating the surface, whereas X-ray structural analysis of the amyloids showed ion-dependent shape sizes. Molecular dynamics simulations showed that the metals can strongly affect the local conformational space, which can trigger major rearrangements of the fibrils. Our results demonstrate that the conformational landscape of catalytic amyloids is broad and tunable by external factors, which can be critical for future design strategies.
引用
收藏
页码:6094 / 6106
页数:13
相关论文
共 81 条
  • [11] Recent progress on understanding the mechanisms of amyloid nucleation
    Chatani E.
    Yamamoto N.
    [J]. Biophysical Reviews, 2018, 10 (2) : 527 - 534
  • [12] Protein Misfolding, Amyloid Formation, and Human Disease: A Summary of Progress Over the Last Decade
    Chiti, Fabrizio
    Dobson, Christopher M.
    [J]. ANNUAL REVIEW OF BIOCHEMISTRY, VOL 86, 2017, 86 : 27 - 68
  • [13] Carbonic anhydrase: Evolution of the zinc binding site by nature and by design
    Christianson, DW
    Fierke, CA
    [J]. ACCOUNTS OF CHEMICAL RESEARCH, 1996, 29 (07) : 331 - 339
  • [14] Atomic Resolution Structure of Monomorphic Aβ42 Amyloid Fibrils
    Colvin, Michael T.
    Silvers, Robert
    Ni, Qing Zhe
    Can, Thach V.
    Sergeyev, Ivan
    Rosay, Melanie
    Donovan, Kevin J.
    Michael, Brian
    Wall, Joseph
    Linse, Sara
    Griffin, Robert G.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (30) : 9663 - 9674
  • [15] Specificity of Non-Michaelis-Menten Enzymes: Necessary Information for Analyzing Metabolic Pathways
    Cornish-Bowden, Athel
    Cardenas, Maria Luz
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2010, 114 (49) : 16209 - 16213
  • [16] Cofactor molecules maintain infectious conformation and restrict strain properties in purified prions
    Deleault, Nathan R.
    Walsh, Daniel J.
    Piro, Justin R.
    Wang, Fei
    Wang, Xinhe
    Ma, Jiyan
    Rees, Judy R.
    Supattapone, Surachai
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (28) : E1938 - E1946
  • [17] pH-Responsive Self-Assembly of Amyloid Fibrils for Dual Hydrolase-Oxidase Reactions
    Diaz-Caballero, Marta
    Navarro, Susanna
    Nuez-Martinez, Miquel
    Peccati, Francesca
    Rodriguez-Santiago, Luis
    Sodupe, Mariona
    Teixidor, Francesc
    Ventura, Salvador
    [J]. ACS CATALYSIS, 2021, 11 (02) : 595 - 607
  • [18] Catalytically Active Amyloids as Future Bionanomaterials
    Diaz-Espinoza, Rodrigo
    [J]. NANOMATERIALS, 2022, 12 (21)
  • [19] Recent High-Resolution Structures of Amyloids Involved in Neurodegenerative Diseases
    Diaz-Espinoza, Rodrigo
    [J]. FRONTIERS IN AGING NEUROSCIENCE, 2021, 13
  • [20] Overcoming electrostatic repulsions during amyloid assembly: Effect of pH and interaction with divalent metals using model peptides
    Diaz-Espinoza, Rodrigo
    Nova, Esteban
    Monasterio, Octavio
    [J]. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2017, 621 : 46 - 53