The complete mitochondrial genome of Stibochiona nicea (Gray, 1846) (Lepidoptera: Nymphalidae) and phylogenetic analysis

被引：0

作者：

Zhang, Hangying ^{[1
,2
,3
]}

Chen, Qinghe ^{[1
]}

Xie, Qiaoyu ^{[1
]}

Lin, Qinghua ^{[1
]}

Sun, Gang ^{[1
,2
]}

Fang, Yan ^{[1
,2
]}

Shi, Qinghui ^{[1
,2
,3
]}

机构：

[1] Sanming Univ, Sch Resources & Chem Engn, Sanming, Peoples R China

[2] Sanming Univ, Fujian Prov Key Lab Resources & Environm Monitorin, Sanming, Peoples R China

[3] Sanming Univ, Med Plant Exploitat & Utilizat Engn Res Ctr, Sanming, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 06期

关键词：

Nymphalidae; Stibochiona nicea; mitochondrial genome; phylogeny;

D O I：

10.1080/23802359.2023.2221348

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In this study, the complete mitochondrial genome (mitogenome) of Stibochiona nicea (Gray, 1846) (Lepidoptera: Nymphalidae) was first reported with 15,298 bp in size, containing 13 protein-coding genes (PCGs), 22 tRNA genes, two rRNA genes (rrnL and rrnS), and one control region. The nucleotide composition of the entire mitogenome is highly A + T biased (81.5%). The gene content and arrangement of the newly sequenced mitogenome are identical to those of the other available mitogenomes of Nymphalidae. All PCGs start with the conventional ATN codons, except for cox1 initiating with atypical CGA(R). Nine PCGs (atp8, atp6, cox3, nad1, nad2, nad3, nad4l, nad6, and cob) utilize a typical stop codon TAA, whereas the remaining PCGs (cox1, cox2, nad4, and nad5) end with an incomplete stop codon T-. Phylogenetic analysis revealed that S. nicea is closely related to Dichorragia nesimachus within Pseudergolinae, which further forms the sister group to the grouping of (Nymphalinae + (Cyrestinae + (Biblidinae + Apaturinae))). The complete mitogenome of S. nicea will provide useful genetic information for improving the taxonomic system and phylogenetics of Nymphalidae.

引用

页码：648 / 652

页数：5

共 17 条

[1]

Ackery Philip R., 1999, Handbuch der Zoologie (Berlin), V4, P263

[2]

Boggs C.L., 2003, Butterflies: ecology and evolution taking flight

[3] Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny [J].

Cameron, Stephen L. .

ANNUAL REVIEW OF ENTOMOLOGY, VOL 59, 2014, 2014, 59 :95-117

[4] jModelTest 2: more models, new heuristics and parallel computing [J].

Darriba, Diego ;

Taboada, Guillermo L. ;

Doallo, Ramon ;

Posada, David .

NATURE METHODS, 2012, 9 (08) :772-772

[5] A Comprehensive and Dated Phylogenomic Analysis of Butterflies [J].

Espeland, Marianne ;

Breinholt, Jesse ;

Willmott, Keith R. ;

Warren, Andrew D. ;

Vila, Roger ;

Toussaint, Emmanuel F. A. ;

Maunsell, Sarah C. ;

Aduse-Poku, Kwaku ;

Talavera, Gerard ;

Eastwood, Rod ;

Jarzyna, Marta A. ;

Guralnick, Robert ;

Lohman, David J. ;

Pierce, Naomi E. ;

Kawahara, Akito Y. .

CURRENT BIOLOGY, 2018, 28 (05) :770-+

[6] OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes [J].

Greiner, Stephan ;

Lehwark, Pascal ;

Bock, Ralph .

NUCLEIC ACIDS RESEARCH, 2019, 47 (W1) :W59-W64

[7]

Hall T.A., 1999, Nucleic Acids Symposium Series, V41, P95, DOI [DOI 10.14344/IOC.ML.11.1, DOI 10.1021/BK-1999-0734.CH008]

[8] Complete mitochondrial genomes of five skippers (Lepidoptera: Hesperiidae) and phylogenetic reconstruction of Lepidoptera [J].

Kim, Min Jee ;

Wang, Ah Rha ;

Park, Jeong Sun ;

Kim, Iksoo .

GENE, 2014, 549 (01) :97-112

[9] IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies [J].

Lam-Tung Nguyen ;

Schmidt, Heiko A. ;

von Haeseler, Arndt ;

Bui Quang Minh .

MOLECULAR BIOLOGY AND EVOLUTION, 2015, 32 (01) :268-274

[10] The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae) [J].

Salvato, Paola ;

Simonato, Mauro ;

Battisti, Andrea ;

Negrisolo, Enrico .

BMC GENOMICS, 2008, 9 (1)

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