A risk model based on ferroptosis- and cuproptosis-related lncRNAs predicts prognosis and immune microenvironment in lung adenocarcinoma by bioinformatics analysis and experimental verification

被引:0
|
作者
Xu, Xiaoying [1 ,2 ]
Feng, Xinzhi [3 ]
Zhang, Pengju [4 ]
Lin, Xiaoyan [1 ,2 ]
机构
[1] Shandong First Med Univ, Shandong Acad Med Sci, Coll Basic Med, Jinan, Shandong, Peoples R China
[2] Shandong First Med Univ, Shandong Prov Hosp, Dept Pathol, Jinan, Shandong, Peoples R China
[3] Shandong First Med Univ, Shandong Prov Hosp, Dept Radiol, Jinan, Shandong, Peoples R China
[4] Shandong Univ, Cheeloo Coll Med, Sch Basic Med Sci, Dept Biochem & Mol Biol, Jinan, Shandong, Peoples R China
来源
AMERICAN JOURNAL OF CANCER RESEARCH | 2023年 / 13卷 / 11期
基金
中国国家自然科学基金;
关键词
Bioinformatics analysis; lung adenocarcinoma; ferroptosis & cuproptosis-related lncRNA; risk model; prognosis; immune microenvironment; CANCER; RESPONSES;
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Ferroptosis and cuproptosis are both novel types of cell death. Long noncoding RNAs (lncRNAs) are associated with multiple cancers. Notably, bioinformatics study of ferroptosis-and cuproptosis-related lncRNAs (FCLs) in lung adenocarcinoma (LUAD) has not been elucidated. In this study, we used univariate Cox, multivariate Cox, and least absolute shrinkage and selection operator Cox (LASSO-Cox) analyses to screen three FCLs, namely AC079193.2, AC090559.1, and AL512363.1. We then showed that these three FCLs were tumor-specific and correlated with ferroptosis and cuproptosis using qRT-PCR. Next, a prognostic risk model consisting of high-and low-risk cohorts was successfully constructed based on The Cancer Genome Atlas-LUAD data. The high-risk group consistently demonstrated poor prognosis. The accuracy of the model was evaluated using AUC, C-index curves, and nomograms. Furthermore, KEGG and GO analysis with R software showed significant enrichment in immune functions and metabolic pathways. Hereto, the immune function and immune cell expression results were more pronounced in the low-risk versus high-risk group. In conclusion, the prognostic risk model comprised of three FCLs effectively predicted patient outcomes and is associated with the immune microenvironment in LUAD.
引用
收藏
页码:5306 / +
页数:16
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