4?-Deoxypyridoxine disrupts vitamin B6 homeostasis in Escherichia coli K12 through combined inhibition of cumulative B6 uptake and PLP- dependent enzyme activity

被引:5
作者
Babor, Jill [1 ]
Tramonti, Angela [2 ,3 ]
Nardella, Caterina [3 ]
Deutschbauer, Adam [4 ]
Contestabile, Roberto [3 ]
de Crecy-Legard, Valerie [1 ,5 ]
机构
[1] Univ Florida, Dept Microbiol & Cell Sci, Gainesville, FL 32611 USA
[2] CNR, Ist Biol & Patol Molecolari, Rome, Italy
[3] Sapienza Univ Roma, Fdn Cenci Bolognetti, Ist Pasteur Italia, Dipartimento Sci Biochim, Rome, Italy
[4] Lawrence Berkeley Natl Lab, Environm Genom & Syst Biol Div, Berkeley, CA USA
[5] Univ Florid, Genet Inst, Gainesville, FL 32610 USA
来源
MICROBIOLOGY-SGM | 2023年 / 169卷 / 04期
基金
美国国家卫生研究院;
关键词
Pyridoxal 5?-phosphate; anti-metabolite; competitive inhibition; PYRIDOXAL KINASE; COLI K-12; IDENTIFICATION; MUTATIONS; MECHANISM; OPERON; GENE;
D O I
10.1099/mic.0.001319
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Pyridoxal 5 '-phosphate (PLP) is the active form of vitamin B6 and a cofactor for many essential metabolic processes such as amino acid biosynthesis and one carbon metabolism. 4'-deoxypyridoxine (4dPN) is a long known B6 antimetabolite but its mechanism of action was not totally clear. By exploring different conditions in which PLP metabolism is affected in the model organism Escherichia coli K12, we showed that 4dPN cannot be used as a source of vitamin B6 as previously claimed and that it is toxic in several conditions where vitamin B6 homeostasis is affected, such as in a B6 auxotroph or in a mutant lacking the recently discovered PLP homeostasis gene, yggS. In addition, we found that 4dPN sensitivity is likely the result of multiple modes of toxicity, including inhibition of PLP-dependent enzyme activity by 4'-deoxypyridoxine phosphate (4dPNP) and inhibi-tion of cumulative pyridoxine (PN) uptake. These toxicities are largely dependent on the phosphorylation of 4dPN by pyridoxal kinase (PdxK).
引用
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页数:17
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共 38 条
  • [1] Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants:: the Keio collection
    Baba, Tomoya
    Ara, Takeshi
    Hasegawa, Miki
    Takai, Yuki
    Okumura, Yoshiko
    Baba, Miki
    Datsenko, Kirill A.
    Tomita, Masaru
    Wanner, Barry L.
    Mori, Hirotada
    [J]. MOLECULAR SYSTEMS BIOLOGY, 2006, 2 (1) : 2006.0008
  • [2] Allosteric feedback inhibition of pyridoxine 5?-phosphate oxidase from Escherichia coli
    Barile, Anna
    Tramonti, Angela
    di Salvo, Martino Luigi
    Nogues, Isabel
    Nardella, Caterina
    Malatesta, Francesco
    Contestabile, Roberto
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2019, 294 (43) : 15593 - 15603
  • [3] THE EFFECT OF A VITAMIN-B-6 ANTAGONIST, 4-DEOXYPYRIDOXINE, ON THE CROSS-LINKING OF COLLAGEN IN THE DEVELOPING CHICK-EMBRYO
    BIRD, TA
    LEVENE, CI
    [J]. BIOCHEMICAL JOURNAL, 1983, 210 (03) : 633 - 638
  • [4] Essential metabolism for a minimal cell
    Breuer, Marian
    Earnest, Tyler M.
    Merryman, Chuck
    Wise, Kim S.
    Sun, Lijie
    Lynottn, Michaels R.
    Hutchison, Clyde A.
    Smith, Hamilton O.
    Lapek, John D.
    Gonzalez, David J.
    De Crecy-Lagard, Valerie
    Haas, Drago
    Hanson, Andrew D.
    Labhsetwar, Piyush
    Glass, John, I
    Luthey-Schulten, Zaida
    [J]. ELIFE, 2019, 8
  • [5] Coburn SP, 2017, CHEM METABOLISM 4 DE
  • [6] Role of tyrosine 65 in the mechanism of serine hydroxymethyltransferase
    Contestabile, R
    Angelaccio, S
    Bossa, F
    Wright, HT
    Scarsdale, N
    Kazanina, G
    Schirch, V
    [J]. BIOCHEMISTRY, 2000, 39 (25) : 7492 - 7500
  • [7] Mutations in PROSC Disrupt Cellular Pyridoxal Phosphate Homeostasis and Cause Vitamin-B6-Dependent Epilepsy
    Darin, Niklas
    Reid, Emma
    Prunetti, Laurence
    Samuelsson, Lena
    Husain, Ralf A.
    Wilson, Matthew
    El Yacoubi, Basma
    Footitt, Emma
    Chong, W. K.
    Wilson, Louise C.
    Prunty, Helen
    Pope, Simon
    Heales, Simon
    Lascelles, Karine
    Champion, Mike
    Wassmer, Evangeline
    Veggiotti, Pierangelo
    de Crecy-Lagard, Valerie
    Mills, Philippa B.
    Clayton, Peter T.
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2016, 99 (06) : 1325 - 1337
  • [8] One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    Datsenko, KA
    Wanner, BL
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (12) : 6640 - 6645
  • [9] Deatherage DE, 2014, METHODS MOL BIOL, V1151, P165, DOI 10.1007/978-1-4939-0554-6_12
  • [10] di Salvo Martino L, 2012, Front Biosci (Elite Ed), V4, P897, DOI 10.2741/E428