Biomolecular feedback controllers: from theory to applications

被引:13
作者
Filo, Maurice [1 ]
Chang, Ching-Hsiang [1 ]
Khammash, Mustafa [1 ]
机构
[1] Swiss Fed Inst Technol, Dept Biosyst Sci & Engn, Mattenstr 26, CH-4058 Basel, Switzerland
关键词
ROBUST PERFECT ADAPTATION; SYNTHETIC BIOLOGY; DESIGN; IMPLEMENTATION; CONSTRUCTION; HOMEOSTASIS; STABILITY; NETWORK; GENE;
D O I
10.1016/j.copbio.2022.102882
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Billions of years of evolution have led to the creation of sophisticated genetic regulatory mechanisms that control various biological processes in a timely and precise fashion, despite their uncertain and noisy environments. Understanding such naturally existing mechanisms and even designing novel ones will have direct implications in various fields such as biotechnology, medicine, and synthetic biology. In particular, many studies have revealed that feedback-based control mechanisms inside the living cells endow the overall system with multiple attractive features, including homeostasis, noise reduction, and high dynamic performance. The remarkable interdisciplinary nature of these studies has brought together disparate disciplines such as systems/synthetic biology and control theory in an effort to design and build more powerful and reliable biomolecular control systems. Here, we review various biomolecular feedback controllers, highlight their characteristics, and point out their promising impact.
引用
收藏
页数:8
相关论文
共 50 条
  • [21] Optimal state feedback control for wireless networked control systems with decentralised controllers
    Wang, Zhuwei
    Wang, Xiaodong
    Liu, Lihan
    Huang, Mo
    IET CONTROL THEORY AND APPLICATIONS, 2015, 9 (06) : 852 - 862
  • [22] Cybergenetics: Theory and Applications of Genetic Control Systems
    Khammash, Mustafa H.
    PROCEEDINGS OF THE IEEE, 2022, 110 (05) : 631 - 658
  • [23] Nonovershooting state feedback and dynamic output feedback tracking controllers for descriptor systems
    Kazantzidou, Christina
    Schmid, Robert
    Ntogramatzidis, Lorenzo
    INTERNATIONAL JOURNAL OF CONTROL, 2018, 91 (08) : 1785 - 1800
  • [24] A universal biomolecular integral feedback controller for robust perfect adaptation
    Aoki, Stephanie K.
    Lillacci, Gabriele
    Gupta, Ankit
    Baumschlager, Armin
    Schweingruber, David
    Khammash, Mustafa
    NATURE, 2019, 570 (7762) : 533 - +
  • [25] Digital redesign of observer-based output-feedback tracking controllers: enhancement
    Moon, Ji Hyun
    Lee, Ho Jae
    INTERNATIONAL JOURNAL OF CONTROL, 2014, 87 (11) : 2420 - 2429
  • [26] Conformal prediction under feedback covariate shift for biomolecular design
    Fannjiang, Clara
    Bates, Stephen
    Angelopoulos, Anastasios N.
    Listgarten, Jennifer
    Jordan, Michael I.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2022, 119 (43)
  • [27] Robustness guarantees for structured model reduction of dynamical systems with applications to biomolecular models
    Pandey, Ayush
    Murray, Richard M.
    INTERNATIONAL JOURNAL OF ROBUST AND NONLINEAR CONTROL, 2023, 33 (09) : 5058 - 5086
  • [28] Theory and Simulation of Multiphase Coexistence in Biomolecular Mixtures
    Jacobs, William M.
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2023, 19 (12) : 3429 - 3445
  • [29] Discrete robust switched H∞ tracking state feedback controllers for lateral vehicle control
    Lghani, Menhour
    Damien, Koenig
    Brigitte, d'Andrea-Novel
    CONTROL ENGINEERING PRACTICE, 2015, 42 : 50 - 59
  • [30] Issues on stability of ADP feedback controllers for dynamical systems
    Balakrishnan, S. N.
    Ding, Jie
    Lewis, Frank L.
    IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART B-CYBERNETICS, 2008, 38 (04): : 913 - 917