COVIDAL: A Machine Learning Classifier for Digital COVID-19 Diagnosis in German Hospitals

被引:3
作者
Bartenschlager, Christina C. [1 ]
Ebel, Stefanie S. [1 ]
Kling, Sebastian [1 ]
Vehreschild, Janne [2 ,3 ,4 ,5 ]
Zabel, Lutz T. [6 ]
Spinner, Christoph D. [7 ]
Schuler, Andreas [8 ]
Heller, Axel R. [9 ]
Borgmann, Stefan [10 ]
Hoffmann, Reinhard [11 ]
Rieg, Siegbert [12 ]
Messmann, Helmut [13 ]
Hower, Martin [14 ]
Brunner, Jens O. [1 ]
Hanses, Frank [15 ,16 ]
Rommele, Christoph [13 ]
机构
[1] Univ Augsburg, Fac Business & Econ, Fac Med, Chair Hlth Care Operat Hlth Informat Management, Univ Str 16, D-86159 Augsburg, Germany
[2] Goethe Univ, Dept Internal Med 2, Hematol Oncol, Theodor Stern Kai 7, D-60590 Frankfurt, Germany
[3] Univ Cologne, Fac Med, Dept Internal Med 1, Cologne, Germany
[4] Univ Cologne, Univ Hosp Cologne, Cologne, Germany
[5] German Ctr Infect Res DZIF, Partner Site Bonn Cologne, Cologne, Germany
[6] Alb Fils Kliniken GmbH, Lab Med, Eichertstr 3, Goppingen, Germany
[7] Tech Univ Munich, Sch Med, Univ Hosp Rechts Isar, Dept Internal Med 2, Ismaninger Str 22, Munich, Germany
[8] Alb Fils Kliniken GmbH, Gastroenterol, Eichertstr 3, Goppingen, Germany
[9] Univ Augsburg, Med Fac, Anaesthesiol & Operat Intens Care Med, Stenglinstr 2, D-86156 Augsburg, Germany
[10] Klinikum Ingolstadt, Hyg & Infectiol, Krumenauerstr 25, D-85049 Ingolstadt, Germany
[11] Univ Augsburg, Med Fac, Lab Med & Microbiol, Stenglinstr 2, D-86156 Augsburg, Germany
[12] Univ Hosp Freiburg, Clin Internal Med Infectiol 2, Hugstetter Str 55, D-79106 Freiburg, Germany
[13] Univ Hosp Augsburg, Clin Internal Med Gastroenterol & Infect Dis 3, Stenglinstr 2, D-86156 Augsburg, Germany
[14] Hosp Univ Witten Herdecke, Dept Pneumol Infect Dis & Intens Care, Klinikum Dortmund gGmbH, Munsterstr 240, D-44145 Dortmund, Germany
[15] Univ Hosp Regensburg, Emergency Dept, Regensburg, Germany
[16] Univ Hosp Regensburg, Dept Infect Control & Infect Dis, Franz Josef Strauss Allee 11, D-93053 Regensburg, Germany
关键词
Machine learning; COVID-19; diagnosis; multicenter data; PREDICTION; MODEL;
D O I
10.1145/3567431
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
For the fight against the COVID-19 pandemic, it is particularly important to map the course of infection, in terms of patients who have currently tested SARS-CoV-2 positive, as accurately as possible. In hospitals, this is even more important because resources have become scarce. Although polymerase chain reaction (PCR) and point of care (POC) antigen testing capacities have been massively expanded, they are often very time-consuming and cost-intensive and, in some cases, lack appropriate performance. To meet these challenges, we propose the COVIDAL classifier for AI-based diagnosis of symptomatic COVID-19 subjects in hospitals based on laboratory parameters. We evaluate the algorithm's performance by unique multicenter data with approximately 4,000 patients and an extraordinary high ratio of SARS-CoV-2-positive patients. We analyze the influence of data preparation, flexibility in optimization targets, as well as the selection of the test set on the COVIDAL outcome. The algorithm is compared with standard AI, PCR, POC antigen testing and manual classifications of seven physicians by a decision theoretic scoring model including performance metrics, turnaround times and cost. Thereby, we define health care settings in which a certain classifier for COVID-19 diagnosis is to be applied. We find sensitivities, specificities, and accuracies of the COVIDAL algorithm of up to 90 percent. Our scoring model suggests using PCR testing for a focus on performance metrics. For turnaround times, POC antigen testing should be used. If balancing performance, turnaround times, and cost is of interest, as, for example, in the emergency department, COVIDAL is superior based on the scoring model.
引用
收藏
页数:16
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