An immune-related multi-omics analysis of dolichyl-diphosphooligosaccharide protein glycosyltransferase in glioma: Prognostic value exploration and competitive endogenous RNA network identification

被引:2
|
作者
Liu, Jie [1 ]
Feng, Chao [2 ]
Liu, Min [3 ,4 ]
Zhou, Yan [5 ]
Shen, Yuezhen [6 ]
Li, Jianxin [7 ]
Wei, Xiangyang [7 ]
机构
[1] Second Peoples Hosp Liaocheng, Dept Neurosurg, Liaocheng, Peoples R China
[2] Peoples Hosp LaoLing, Dept Neurosurg, LaoLing, Peoples R China
[3] Tianjin Med Univ, Chu Hsien I Mem Hosp, NHC Key Lab Hormones & Dev, Tianjin Key Lab Metab Dis, Tianjin, Peoples R China
[4] Tianjin Med Univ, Tianjin Inst Endocrinol, Tianjin, Peoples R China
[5] Huazhong Univ Sci & Technol, Union Hosp, Tongji Med Coll, Dept Neurosurg, Wuhan, Peoples R China
[6] Second Peoples Hosp Liaocheng, Dept Neurol, Liaocheng, Peoples R China
[7] Chinese Peoples Armed Police Force, Inst Neurol Trauma & Repair, Characterist Med Ctr, Tianjin, Peoples R China
基金
中国国家自然科学基金;
关键词
ceRNA; DDOST; DNA methylation; Glioma; Immune microenvironment; GENE-EXPRESSION; PD-1; BLOCKADE; END-PRODUCTS; CANCER; CERNA; CLASSIFICATION; NEOANTIGENS; SENSITIVITY; TARGET;
D O I
10.1049/syb2.12075
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Dolichyl-diphosphooligosaccharide protein glycosyltransferase (DDOST) plays a pivotal role in the glycosylation of asparagine residues on nascent polypeptides. However, the biological role of DDOST in glioma remains unclear. The mRNA expression of DDOST in glioma was identified using TCGA, CGGA, GEO and Rembrandt datasets. Immunohistochemistry assay was conducted to examine the protein level of DDOST. Cox regression analysis, nomograms and calibration plots were used to evaluate the prognostic value of DDOST. The association between DDOST and immune cell infiltration was evaluated using CIBERSORT algorithm. Additionally, DNA methylation and ceRNA regulatory network of DDOST expression were investigated using the LinkedOmics and ENCORI databases. The authors found that DDOST was substantially expressed at the mRNA and protein levels. Functional enrichment analysis revealed close associations between DDOST and immune-related pathways, as well as immune cell infiltration. In addition, DDOST exhibited synergistic effects with tumour mutational burden (TMB) and other immune checkpoints. For expression regulation mechanisms, DDOST had low DNA methylation levels in high-grade gliomas and may be involved in multiple ceRNA networks in glioma. Thus, DDOST may serve as an unfavourable biomarker for gliomas. DNA methylation and ceRNA regulatory networks of DDOST expression were identified for the first time in this multi-omics study.
引用
收藏
页码:271 / 287
页数:17
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