SARS-CoV-2 RNA-dependent RNA polymerase as a target for high-throughput drug screening

被引:5
作者
Wu, Jiahui [1 ]
Chen, Zhiqiang [1 ,2 ]
Han, Xue [3 ]
Chen, Qiaoqiao [1 ]
Wang, Yintao [1 ]
Feng, Tingting [1 ]
机构
[1] Soochow Univ, Inst Biol & Med Sci, Jiangsu Key Lab Infect & Immun, Suzhou 215123, Jiangsu, Peoples R China
[2] Soochow Univ, Affiliated Hosp 1, Dept Nucl Med, Suzhou 215000, Jiangsu, Peoples R China
[3] Qingdao Univ, Affiliated Hosp, Dept Clin Lab, 59 Haier Rd, Qingdao 266000, Shandong, Peoples R China
关键词
COVID-19; high-throughput screening; nsp12-nsp8-nsp7; RNA-dependent RNA polymerase; SARS-CoV-2; STRUCTURAL BASIS; REPLICATION; CORONAVIRUS; SARS; PROTEIN; IDENTIFICATION; NUCLEOSIDE; INHIBITORS; ANALOGS; NSP12;
D O I
10.2217/fvl-2021-0335
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The ongoing COVID-19 pandemic caused by the SARS-CoV-2 has necessitated rapid development of drug screening tools. RNA-dependent RNA polymerase (RdRp) is a promising target due to its essential functions in replication and transcription of viral genome. To date, through minimal RNA synthesizing machinery established from cryo-electron microscopy structural data, there has been development of high-throughput screening assays for directly screening inhibitors that target the SARS-CoV-2 RdRp. Here, we analyze and present verified techniques that could be used to discover potential anti-RdRp agents or repurposing of approved drugs to target the SARS-CoV-2 RdRp. In addition, we highlight the characteristics and application value of cell-free or cell-based assays in drug discovery.
引用
收藏
页码:51 / 62
页数:12
相关论文
共 50 条
  • [41] Electron Density Analysis of SARS-CoV-2 RNA-Dependent RNA Polymerase Complexes
    Palko, Nadezhda
    Grishina, Maria
    Potemkin, Vladimir
    MOLECULES, 2021, 26 (13):
  • [42] Screening of potent drug inhibitors against SARS-CoV-2 RNA polymerase: an in silico approach
    Singh, Sanjay Kumar
    Upadhyay, Atul Kumar
    Reddy, M. Sudhakara
    3 BIOTECH, 2021, 11 (02)
  • [43] Mutations in the SARS-CoV-2 RNA-dependent RNA polymerase confer resistance to remdesivir by distinct mechanisms
    Stevens, Laura J.
    Pruijssers, Andrea J.
    Lee, Hery W.
    Gordon, Calvin J.
    Tchesnokov, Egor P.
    Gribble, Jennifer
    George, Amelia S.
    Hughes, Tia M.
    Lu, Xiaotao
    Li, Jiani
    Perry, Jason K.
    Porter, Danielle P.
    Cihlar, Tomas
    Sheahan, Timothy P.
    Baric, Ralph S.
    Gotte, Matthias
    Denison, Mark R.
    SCIENCE TRANSLATIONAL MEDICINE, 2022, 14 (656)
  • [44] The potential chemical structure of anti-SARS-CoV-2 RNA-dependent RNA polymerase
    Lung, Jrhau
    Lin, Yu-Shih
    Yang, Yao-Hsu
    Chou, Yu-Lun
    Shu, Li-Hsin
    Cheng, Yu-Ching
    Liu, Hung Te
    Wu, Ching-Yuan
    JOURNAL OF MEDICAL VIROLOGY, 2020, 92 (06) : 693 - 697
  • [45] Recent Advancements in the Delivery of Therapeutic Agents Targeting RNA-dependent RNA Polymerase of SARS-CoV-2
    Mahajan, Kalpesh
    Pawar, Dipika
    Bhattacharya, Sankha
    CURRENT MEDICINAL CHEMISTRY, 2024,
  • [46] Identifying Small-Molecule Inhibitors of SARS-CoV-2 RNA-Dependent RNA Polymerase by Establishing a Fluorometric Assay
    Bai, Xiaoming
    Sun, Hongmin
    Wu, Shuo
    Li, Yuhuan
    Wang, Lifei
    Hong, Bin
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [47] Raltegravir, Indinavir, Tipranavir, Dolutegravir, and Etravirine against main protease and RNA-dependent RNA polymerase of SARS-CoV-2: A molecular docking and drug repurposing approach
    Indu, Purushothaman
    Rameshkumar, Marimuthu Ragavan
    Arunagirinathan, Narasingam
    Al-Dhabi, Naif Abdullah
    Arasu, Mariadhas Valan
    Ignacimuthu, Savarimuthu
    JOURNAL OF INFECTION AND PUBLIC HEALTH, 2020, 13 (12) : 1856 - 1861
  • [48] Effects of natural polymorphisms in SARS-CoV-2 RNA-dependent RNA polymerase on its activity and sensitivity to inhibitors in vitro
    Miropolskaya, Nataliya
    Kozlov, Maxim
    Petushkov, Ivan
    Prostova, Maria
    Pupov, Danil
    Esyunina, Daria
    Kochetkov, Sergey
    Kulbachinskiy, Andrey
    BIOCHIMIE, 2023, 206 : 81 - 88
  • [49] Potential use of RNA-dependent RNA polymerase (RdRp) inhibitors against SARS-CoV2 infection
    Allen, Charles N. S.
    Arjona, Sterling P.
    Santerre, Maryline
    Sawaya, Bassel E.
    ALL LIFE, 2020, 13 (01) : 608 - 614