SARS-CoV-2 RNA-dependent RNA polymerase as a target for high-throughput drug screening

被引:5
|
作者
Wu, Jiahui [1 ]
Chen, Zhiqiang [1 ,2 ]
Han, Xue [3 ]
Chen, Qiaoqiao [1 ]
Wang, Yintao [1 ]
Feng, Tingting [1 ]
机构
[1] Soochow Univ, Inst Biol & Med Sci, Jiangsu Key Lab Infect & Immun, Suzhou 215123, Jiangsu, Peoples R China
[2] Soochow Univ, Affiliated Hosp 1, Dept Nucl Med, Suzhou 215000, Jiangsu, Peoples R China
[3] Qingdao Univ, Affiliated Hosp, Dept Clin Lab, 59 Haier Rd, Qingdao 266000, Shandong, Peoples R China
关键词
COVID-19; high-throughput screening; nsp12-nsp8-nsp7; RNA-dependent RNA polymerase; SARS-CoV-2; STRUCTURAL BASIS; REPLICATION; CORONAVIRUS; SARS; PROTEIN; IDENTIFICATION; NUCLEOSIDE; INHIBITORS; ANALOGS; NSP12;
D O I
10.2217/fvl-2021-0335
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The ongoing COVID-19 pandemic caused by the SARS-CoV-2 has necessitated rapid development of drug screening tools. RNA-dependent RNA polymerase (RdRp) is a promising target due to its essential functions in replication and transcription of viral genome. To date, through minimal RNA synthesizing machinery established from cryo-electron microscopy structural data, there has been development of high-throughput screening assays for directly screening inhibitors that target the SARS-CoV-2 RdRp. Here, we analyze and present verified techniques that could be used to discover potential anti-RdRp agents or repurposing of approved drugs to target the SARS-CoV-2 RdRp. In addition, we highlight the characteristics and application value of cell-free or cell-based assays in drug discovery.
引用
收藏
页码:51 / 62
页数:12
相关论文
共 50 条
  • [41] Novel sofosbuvir derivatives against SARS-CoV-2 RNA-dependent RNA polymerase: an in silico perspective
    Abdulwahed Alrehaily
    Abdo A. Elfiky
    Ibrahim M. Ibrahim
    Mohamed N. Ibrahim
    Amr Sonousi
    Scientific Reports, 13
  • [42] Novel adenosine derivatives against SARS-CoV-2 RNA-dependent RNA polymerase: an in silico perspective
    Amr Sonousi
    Hanan A. Mahran
    Ibrahim M. Ibrahim
    Mohamed N. Ibrahim
    Abdo A. Elfiky
    Wael M. Elshemey
    Pharmacological Reports, 2021, 73 : 1754 - 1764
  • [43] Mutations in the SARS-CoV-2 RNA-dependent RNA polymerase confer resistance to remdesivir by distinct mechanisms
    Stevens, Laura J.
    Pruijssers, Andrea J.
    Lee, Hery W.
    Gordon, Calvin J.
    Tchesnokov, Egor P.
    Gribble, Jennifer
    George, Amelia S.
    Hughes, Tia M.
    Lu, Xiaotao
    Li, Jiani
    Perry, Jason K.
    Porter, Danielle P.
    Cihlar, Tomas
    Sheahan, Timothy P.
    Baric, Ralph S.
    Gotte, Matthias
    Denison, Mark R.
    SCIENCE TRANSLATIONAL MEDICINE, 2022, 14 (656)
  • [44] Novel sofosbuvir derivatives against SARS-CoV-2 RNA-dependent RNA polymerase: an in silico perspective
    Alrehaily, Abdulwahed
    Elfiky, Abdo A.
    Ibrahim, Ibrahim M.
    Ibrahim, Mohamed N.
    Sonousi, Amr
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [45] Recent Advancements in the Delivery of Therapeutic Agents Targeting RNA-dependent RNA Polymerase of SARS-CoV-2
    Mahajan, Kalpesh
    Pawar, Dipika
    Bhattacharya, Sankha
    CURRENT MEDICINAL CHEMISTRY, 2024,
  • [46] Non-Nucleotide RNA-Dependent RNA Polymerase Inhibitor That Blocks SARS-CoV-2 Replication
    Dejmek, Milan
    Konkol'ova, Eva
    Eyer, Ludek
    Strakova, Petra
    Svoboda, Pavel
    Sala, Michal
    Krejcova, Katerina
    Ruzek, Daniel
    Boura, Evzen
    Nencka, Radim
    VIRUSES-BASEL, 2021, 13 (08):
  • [47] Novel adenosine derivatives against SARS-CoV-2 RNA-dependent RNA polymerase: an in silico perspective
    Sonousi, Amr
    Mahran, Hanan A.
    Ibrahim, Ibrahim M.
    Ibrahim, Mohamed N.
    Elfiky, Abdo A.
    Elshemey, Wael M.
    PHARMACOLOGICAL REPORTS, 2021, 73 (06) : 1754 - 1764
  • [48] Impact of Remdesivir Incorporation along the Primer Strand on SARS-CoV-2 RNA-Dependent RNA Polymerase
    Naseem-Khan, Sehr
    Berger, Madison B.
    Leddin, Emmett M.
    Maghsoud, Yazdan
    Cisneros, G. Andres
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2022, 62 (10) : 2456 - 2465
  • [49] Piece of the puzzle: Remdesivir disassembles the multimeric SARS-CoV-2 RNA-dependent RNA polymerase complex
    Olotu, Fisayo A.
    Omolabi, Kehinde F.
    Soliman, Mahmoud E. S.
    CELL BIOCHEMISTRY AND BIOPHYSICS, 2021, 79 (02) : 175 - 187
  • [50] Structural Basis of the Potential Binding Mechanism of Remdesivir to SARS-CoV-2 RNA-Dependent RNA Polymerase
    Zhang, Leili
    Zhou, Ruhong
    JOURNAL OF PHYSICAL CHEMISTRY B, 2020, 124 (32): : 6955 - 6962