Molecular Dynamics Simulations of Amylose- and Cellulose-Based Selectors and Related Enantioseparations in Liquid Phase Chromatography

被引:8
|
作者
Dallocchio, Roberto [1 ]
Dessi, Alessandro [1 ]
Sechi, Barbara [1 ]
Peluso, Paola [1 ]
机构
[1] CNR, Inst Biomol Chem ICB, Secondary Branch Sassari, Unit Enantioselect Chromatog & Mol Recognit, Traversa La Crucca 3, I-07100 Sassari, Italy
来源
MOLECULES | 2023年 / 28卷 / 21期
关键词
computational methods; enantioselective recognition; enantioseparation; molecular dynamics; polysaccharide-based selectors; CHIRAL STATIONARY PHASES; PACKING MATERIALS; DIHYDROPYRIMIDINONE ACID; DISCRIMINATION MECHANISM; RECOGNITION MECHANISM; RESOLUTION; DERIVATIVES; SEPARATION; SILICA; TRIS(3,5-DIMETHYLPHENYLCARBAMATE);
D O I
10.3390/molecules28217419
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In the last few decades, theoretical and technical advancements in computer facilities and computational techniques have made molecular modeling a useful tool in liquid-phase enantioseparation science for exploring enantioselective recognition mechanisms underlying enantioseparations and for identifying selector-analyte noncovalent interactions that contribute to binding and recognition. Because of the dynamic nature of the chromatographic process, molecular dynamics (MD) simulations are particularly versatile in the visualization of the three-dimensional structure of analytes and selectors and in the unravelling of mechanisms at molecular levels. In this context, MD was also used to explore enantioseparation processes promoted by amylose and cellulose-based selectors, the most popular chiral selectors for liquid-phase enantioselective chromatography. This review presents a systematic analysis of the literature published in this field, with the aim of providing the reader with a comprehensive picture about the state of the art and what is still missing for modeling cellulose benzoates and the phenylcarbamates of amylose and cellulose and related enantioseparations with MD. Furthermore, advancements and outlooks, as well as drawbacks and pitfalls still affecting the applicability of MD in this field, are also discussed. The importance of integrating theoretical and experimental approaches is highlighted as an essential strategy for profiling mechanisms and noncovalent interaction patterns.
引用
收藏
页数:29
相关论文
共 50 条
  • [21] Normal and polar-organic-phase high-performance liquid chromatographic enantioresolution of omeprazole, rabeprazole, lansoprazole and pantoprazole using monochloro-methylated cellulose-based chiral stationary phase and determination of dexrabeprazole
    Dixit, Shuchi
    Dubey, Rituraj
    Bhushan, Ravi
    BIOMEDICAL CHROMATOGRAPHY, 2014, 28 (01) : 112 - 119
  • [22] Molecular dynamics simulation of separation mechanisms in bonded phase liquid chromatography
    Cheng, CY
    Chen, TL
    Wang, BC
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2002, 577 (01): : 81 - 90
  • [23] Enantioseparation of Chiral Sulfoxides on Amylose-Based Columns: Comparison of Normal Phase Liquid Chromatography and Supercritical Fluid Chromatography
    Natalie Kolderová
    Tomáš Neveselý
    Jiří Šturala
    Martin Kuchař
    Roman Holakovský
    Michal Kohout
    Chromatographia, 2017, 80 : 547 - 557
  • [24] Enantioseparations of polyhalogenated 4,4'-bipyridines on polysaccharide-based chiral stationary phases and molecular dynamics simulations of selector-selectand interactions
    Dallocchio, Roberto
    Sechi, Barbara
    Dessi, Alessandro
    Chankvetadze, Bezhan
    Cossu, Sergio
    Mamane, Victor
    Weiss, Robin
    Pale, Patrick
    Peluso, Paola
    ELECTROPHORESIS, 2021, 42 (17-18) : 1853 - 1863
  • [25] High-performance liquid chromatography chiral stationary phases based on low-molecular-mass selectors
    Gasparrini, F
    Misiti, D
    Villani, C
    JOURNAL OF CHROMATOGRAPHY A, 2001, 906 (1-2) : 35 - 50
  • [26] Immobilized Cellulose-Based Chiralpak IC Chiral Stationary Phase for Enantioseparation of Eight Imidazole Antifungal Drugs in Normal-Phase, Polar Organic Phase and Reversed-Phase Conditions Using High-Performance Liquid Chromatography
    Zhang, Junyuan
    Sun, Jiayi
    Liu, Yanru
    Yu, Jia
    Guo, Xingjie
    CHROMATOGRAPHIA, 2019, 82 (03) : 649 - 660
  • [27] Development of a high-performance liquid chromatography method for the simultaneous determination of chiral impurities and assay of (S)-clopidogrel using a cellulose-based chiral stationary phase in methanol/water mode
    Ferretti, Rosella
    Zanitti, Leo
    Cirilli, Roberto
    JOURNAL OF SEPARATION SCIENCE, 2018, 41 (06) : 1208 - 1215
  • [28] Comparative study on retention behaviour and enantioresolution of basic and neutral structurally unrelated compounds with cellulose-based chiral stationary phases in reversed phase liquid chromatography-mass spectrometry conditions
    Perez-Baeza, Mireia
    Escuder-Gilabert, Laura
    Martin-Biosca, Yolanda
    Sagrado, Salvador
    Medina-Hernandez, Maria Jose
    JOURNAL OF CHROMATOGRAPHY A, 2022, 1673
  • [29] Comparative Enantioseparation of Crufomate with Cellulose- and Amylose-based Chiral Stationary Phases on Reverse-Phase and Normal-Phase High-Performance Liquid Chromatography
    Chai, Tingting
    Wang, Xueqing
    Bie, Mei
    Dai, Shouhui
    Zhao, Hualin
    Yang, Shuming
    Qiu, Jing
    ASIAN JOURNAL OF CHEMISTRY, 2013, 25 (02) : 797 - 802
  • [30] Comparative modelling study on enantioresolution of structurally unrelated compounds with amylose-based chiral stationary phases in reversed phase liquid chromatography-mass spectrometry conditions
    Perez-Baeza, Mireia
    Escuder-Gilabert, Laura
    Martin-Biosca, Yolanda
    Sagrado, Salvador
    Jose Medina-Hernandez, Maria
    JOURNAL OF CHROMATOGRAPHY A, 2020, 1625