The complete chloroplast genome of Senna alata (L.) Roxb., an important medicinal plant from the Philippines

被引：3

作者：

Quinones, Kristine J. O. ^{[1
]}

Gentallan Jr, Renerio P. ^{[1
]}

Bartolome, Michael C. B. ^{[1
]}

Madayag, Roselle E. ^{[1
,3
]}

Vera Cruz, Juan R. A. ^{[1
]}

Cirunay, Angeleigh R. T. ^{[2
]}

Endonela, Leah E. ^{[1
]}

Timog, Emmanuel B. S. ^{[1
,4
]}

Borromeo, Teresita H. ^{[1
]}

Altoveros, Nestor C. ^{[1
]}

Alvaran, Bartimeus B. S. ^{[1
,2
]}

Magtoltol, Jessabel B. ^{[1
,3
]}

Cejalvo, Reneliza D. ^{[1
]}

机构：

[1] Univ Philippines Los Banos, Inst Crop Sci, Coll Agr & Food Sci, Los Banos 4031, Philippines

[2] Univ Philippines Los Banos, Inst Food Sci, Coll Agr & Food Sci, Los Banos 4031, Philippines

[3] Univ Philippines Los Banos, Agr Syst Inst, Coll Agr & Food Sci, Los Banos 4031, Philippines

[4] Univ Philippines Los Banos, Coll Forestry & Nat Resources, Dept Forest Biol Sci, Los Banos 4031, Philippines

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 02期

关键词：

Cassia alata; Fabaceae; Cassinae; chloroplast genome; medicinal plant; SEQUENCE;

D O I：

10.1080/23802359.2023.2172973

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Senna alata, a flowering shrub, is widely cultivated in the Philippines for its anti-fungal properties. Despite this, its chloroplast genome is not yet established. We assembled and annotated the complete chloroplast genome of accession from the germplasm collection of the Institute of Crop Science, University of the Philippines, Los Banos, using Illumina sequencing data. The complete cp genome was 159,176-bp long characterized by a large single copy of 88,769 bp, short single-copy of 18,301 bp and a pair of inverted repeat regions of 26,053 bp each. The overall GC content of the chloroplast genome was 36.4%. The plastome comprised 37 tRNA genes, 8 rRNA genes and 78 mRNA genes. Phylogenetic analysis showed that S. alata is closely related to S. siamea.

引用

页码：244 / 248

页数：5

共 50 条

[41] The complete chloroplast genome sequence of medicinal plant, Artemisia gmelinii
Hu, Kun
Zhen, Changhui
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2337 - 2338
[42] Complete chloroplast genome sequence of the medicinal plant Gynostemma pentaphyllum
Zeng, Xin-Yi
Zou, Li-Qiu
Kuang, Xue-Jun
Li, Ying
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01): : 791 - 792
[43] The complete chloroplast genome sequence of medicinal plant, Artemisia Montana
Cao, Xueyun
Zhao, Miao
Qi, Jing
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2137 - 2138
[44] Complete chloroplast genome sequence of the medicinal plant Arctium lappa
Nie, Liping
Cui, Yingxian
Chen, Xinlian
Xu, Zhichao
Sun, Wei
Wang, Yu
Song, Jingyuan
Yao, Hui
GENOME, 2020, 63 (01) : 53 - 60
[45] The Complete Chloroplast Genome Sequences of the Medicinal Plant Pogostemon cablin
He, Yang
Xiao, Hongtao
Deng, Cao
Xiong, Liang
Yang, Jian
Peng, Cheng
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2016, 17 (06)
[46] The complete chloroplast genome sequence of the medicinal plant Persicaria filiformis
Zhang, Kun
Gao, Zhihui
Han, Zhiping
Shan, Xiaofei
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2324 - 2325
[47] The complete chloroplast genome sequence of the medicinal plant Andrographis paniculata
Ding, Ping
Shao, Yanhua
Li, Qian
Gao, Junli
Zhang, Runjing
Lai, Xiaoping
Wang, Deqin
Zhang, Huiye
MITOCHONDRIAL DNA PART A, 2016, 27 (04) : 2347 - 2348
[48] Complete chloroplast genome sequences of the medicinal plant Piper hancei
Zhang, Lvshui
Hu, Xiaokang
Liu, Mu
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (09): : 2775 - 2776
[49] The complete chloroplast genome of the Tibetan medicinal plant Rhodiola kirilowii
Zhang, Guoying
Liu, Yarong
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 222 - 223
[50] The complete chloroplast genome sequence of medicinal plant,Selaginella involvens
Qiu, Dangying
Wen, Yangmin
Xie, Yonghua
Lin, Qingfan
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2605 - 2606

← 1 2 3 4 5 →