Cost-effective, high-yield production of Pyrobaculum calidifontis DNA polymerase for PCR application

被引:0
作者
Maseh, Kashif [1 ]
Ali, Syed Farhat [1 ]
Ahmad, Shazeel [2 ]
Rashid, Naeem [2 ]
机构
[1] Forman Christian Coll, KAM Sch Life Sci, Lahore, Pakistan
[2] Univ Punjab, Sch Biol Sci, Lahore, Pakistan
关键词
DNA polymerase; expression optimization; polymerase chain reaction (PCR); purification; Pyrobaculum calidifontis; stability; ESCHERICHIA-COLI; PROTEIN; EXPRESSION; OPTIMIZATION; STRATEGIES; INDUCTION; DIVERSITY; EVOLUTION;
D O I
10.1080/10826068.2022.2137731
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Polymerase Chain Reaction (PCR) is widely used for cloning, genetic engineering, mutagenesis, detection and diagnosis. A thermostable DNA polymerase is required for PCR. Here we describe low-cost and high-recovery production of Pyrobaculum calidifontis DNA polymerase (Pca-Pol). The gene was cloned in pET-28a and expressed in Escherichia coli BL21CodonPlus. Gene expression conditions were optimized. Eventually, gene expression was induced with 0.1 mM IPTG for 3 hours at 37 degrees C. Recombinant Pca-Pol produced was purified to homogeneity by immobilized metal-ion affinity chromatography yielding around 9000 U of Pca-Pol per liter of the culture with a recovery of 92%. Stability and PCR amplification efficiency of Pca-Pol was tested under various storage conditions with highest efficiency in 25 mM Tris-Cl buffer (pH 8.5) containing 0.1% Tween 20, 0.2 mg/mL BSA and 20% glycerol. Under this condition, no loss in PCR activity of Pca-Pol was observed, even after one year of storage. Repeated freeze-thaw, however, deteriorated enzyme activity of Pca-Pol. 55% PCR amplification activity retained after 7 prolong freeze-thaw cycles (freezing overnight at -20 degrees C and thawing for 45 minutes at 28 degrees C). Purified Pca-Pol possessed 3 '-5 ' exonuclease (proofreading) activity and is expected to have greater fidelity as compared to Taq polymerase which does not have proofreading activity.
引用
收藏
页码:704 / 711
页数:8
相关论文
共 34 条
  • [11] Extremozymes: A Potential Source for Industrial Applications
    Dumorne, Kelly
    Camacho Cordova, David
    Astorga-Elo, Marcia
    Renganathan, Prabhaharan
    [J]. JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 2017, 27 (04) : 649 - 659
  • [12] Enzyme Stability in Nanoparticle Preparations Part 1: Bovine Serum Albumin Improves Enzyme Function
    Duskey, Jason Thomas
    da Ros, Federica
    Ottonelli, Ilaria
    Zambelli, Barbara
    Vandelli, Maria Angela
    Tosi, Giovanni
    Ruozi, Barbara
    [J]. MOLECULES, 2020, 25 (20):
  • [13] Expression optimization, purification, and functional characterization of cholesterol oxidase from Chromobacterium sp. DS1
    Fazaeli, Aliakbar
    Golestani, Abolfazl
    Lakzaei, Mostafa
    Varaei, Samaneh Sadat Rasi
    Aminian, Mahdi
    [J]. PLOS ONE, 2019, 14 (02):
  • [14] Low temperature bacterial expression of the neutral amino acid transporters SLC1A5 (ASCT2), and SLC6A19 (B0AT1)
    Galluccio, Michele
    Pantanella, Marta
    Giudice, Deborah
    Brescia, Stefania
    Indiveri, Cesare
    [J]. MOLECULAR BIOLOGY REPORTS, 2020, 47 (09) : 7283 - 7289
  • [15] A highly active heparinase I fromBacteroides cellulosilyticus: Cloning, high level expression, and molecular characterization
    Gao, Li-Wei
    Zhu, Hong-Tao
    Liu, Cai-Yun
    Lv, Zhi-Xiang
    Fan, Xiao-Man
    Zhang, Ye-Wang
    [J]. PLOS ONE, 2020, 15 (10):
  • [16] DNA polymerases as useful reagents for biotechnology - the history of developmental research in the field
    Ishino, Sonoko
    Ishino, Yoshizumi
    [J]. FRONTIERS IN MICROBIOLOGY, 2014, 5
  • [17] Strategies for optimization of heterologous protein expression in E-coli: Roadblocks and reinforcements
    Kaur, Jashandeep
    Kumar, Arbind
    Kaur, Jagdeep
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2018, 106 : 803 - 822
  • [18] Diversity and evolution of B-family DNA polymerases
    Kazlauskas, Darius
    Krupovic, Mart
    Guglielmini, Julien
    Forterre, Patrick
    Venclovas, Ceslovas
    [J]. NUCLEIC ACIDS RESEARCH, 2020, 48 (18) : 10142 - 10156
  • [19] Fusion tags to enhance heterologous protein expression
    Ki, Mi-Ran
    Pack, Seung Pil
    [J]. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2020, 104 (06) : 2411 - 2425
  • [20] Kuypers J, 2017, J CLIN MICROBIOL, V55, P1621, DOI [10.1128/jcm.00211-17, 10.1128/JCM.00211-17]