Computational design of a multi-epitope vaccine candidate against Langya henipavirus using surface proteins

被引:25
|
作者
Ahmad, Sajjad [1 ,2 ,3 ,4 ]
Nazarian, Shahin [5 ]
Alizadeh, Akram [6 ]
Pashapour Hajialilou, Maryam [7 ]
Tahmasebian, Shahram [8 ]
Alharbi, Metab [9 ]
Alasmari, Abdullah F. [9 ]
Shojaeian, Ali [10 ]
Ghatrehsamani, Mahdi [11 ]
Irfan, Muhammad [12 ]
Pazoki-Toroudi, Hamidreza [13 ,14 ]
Sanami, Samira [6 ]
机构
[1] Abasyn Univ, Dept Hlth & Biol Sci, Peshawar, Pakistan
[2] Virginia Tech, Dept Comp Sci, Blacksburg, VA USA
[3] Lebanese Amer Univ, Gilbert & Rose Marie Chagoury Sch Med, Beirut, Lebanon
[4] Lebanese Amer Univ, Dept Nat Sci, Beirut, Lebanon
[5] Univ Southern Calif, Dept Elect & Comp Engn, Los Angeles, CA USA
[6] Semnan Univ Med Sci, Nervous Syst Stem Cells Res Ctr, Semnan, Iran
[7] Iran Univ Sci & Technol IUST, Sch Met & Mat Engn, Tehran, Iran
[8] Shahrekord Univ Med Sci, Sch Adv Technol, Dept Med Biotechnol, Shahrekord, Iran
[9] King Saud Univ, Coll Pharm, Dept Pharmacol & Toxicol, Riyadh, Saudi Arabia
[10] Hamadan Univ Med Sci, Res Ctr Mol Med, Hamadan, Iran
[11] Shahrekord Univ Med Sci, Basic Hlth Sci Inst, Cellular & Mol Res Ctr, Shahrekord, Iran
[12] Univ Florida, Coll Dent, Dept Oral Biol, Gainesville, FL 32608 USA
[13] Iran Univ Med Sci, Fac Med, Physiol Res Ctr, Tehran, Iran
[14] Iran Univ Med Sci, Fac Med, Dept Physiol, Tehran, Iran
来源
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS | 2024年 / 42卷 / 20期
关键词
Langya henipavirus; vaccine; reverse vaccinology; epitope; adjuvant; T-CELL EXHAUSTION; 3-DIMENSIONAL STRUCTURES; ESCHERICHIA-COLI; CODON USAGE; VIRUS; PREDICTION; SOLUBILITY; ANTIGEN; BINDING; WEB;
D O I
10.1080/07391102.2023.2258403
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In July 2022, Langya henipavirus (LayV) was identified in febrile patients in China. There is currently no approved vaccine against this virus. Therefore, this research aimed to design a multi-epitope vaccine against LayV using reverse vaccinology. The best epitopes were selected from LayV's fusion protein (F) and glycoprotein (G), and a multi-epitope vaccine was designed using these epitopes, adjuvant, and appropriate linkers. The physicochemical properties, antigenicity, allergenicity, toxicity, and solubility of the vaccine were evaluated. The vaccine's secondary and 3D structures were predicted, and molecular docking and molecular dynamics (MD) simulations were used to assess the vaccine's interaction and stability with toll-like receptor 4 (TLR4). Immune simulation, codon optimization, and in silico cloning of the vaccine were also performed. The vaccine candidate showed good physicochemical properties, as well as being antigenic, non-allergenic, and non-toxic, with acceptable solubility. Molecular docking and MD simulation revealed that the vaccine and TLR4 have stable interactions. Furthermore, immunological simulation of the vaccine indicated its ability to elicit immune responses against LayV. The vaccine's increased expression was also ensured using codon optimization. This study's findings were encouraging, but in vitro and in vivo tests are needed to confirm the vaccine's protective effect.Communicated by Ramaswamy H. Sarma
引用
收藏
页码:10617 / 10634
页数:18
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