Evaluation of a novel sample preparation method for identifying Aspergillus fumigatus using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry: Combining Yatalase and silica beads treatment

被引:2
|
作者
Tsuchida, Sachio [1 ,2 ]
Yamashita, Koji [3 ,4 ]
Murata, Syota [3 ]
Miyabe, Akiko [3 ]
Satoh, Mamoru [2 ]
Matsushita, Kazuyuki [3 ]
Nakayama, Tomohiro [1 ]
Nomura, Fumio [2 ]
Umemura, Hiroshi [1 ,2 ,5 ]
机构
[1] Nihon Univ, Dept Pathol & Microbiol, Div Lab Med, Sch Med, 30-1 Oyaguchikamicho,Itabashi Ku, Tokyo 1738610, Japan
[2] Chiba Univ Hosp, Div Clin Mass Spectrometry, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[3] Chiba Univ Hosp, Dept Clin Lab, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[4] Chiba Univ, Med Mycol Res Ctr, Div Clin Res, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[5] Nihon Univ, Dept Pathol & Microbiol, Div Lab Med, Sch Med, 30-1 Oyaguchi Kamicho,Itabashi Ku, Tokyo 1738610, Japan
关键词
Matrix-assisted laser desorption ionization; time-of-flight mass spectrometry; Sample preparation; Aspergillus fumigatus; Yatalase; Silica beads; MALDI-TOF-MS; DESORPTION IONIZATION-TIME; IDENTIFICATION; DIAGNOSIS;
D O I
10.1016/j.mimet.2023.106706
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Aspergillus spp. belong to filamentous fungi and sometimes cause invasive aspergillosis which has high mortality. Filamentous fungi are generally identified morphologically. However, morphologic identification is time consuming and requires advanced skills. It is difficult to train technicians and ensure a high level of quality. Therefore, an identification technique that is both accurate and relatively easy to learn is needed. In the present study, we focused on the effects of Yatalase and silica beads, which enable the efficient extraction of proteins via cell wall disruption of Aspergillus spp., and aimed to establish a novel sample preparation method using Yatalase and silica beads to enhance the efficiency of Aspergillus spp. identification with matrix-assisted laser desorption/ ionization time-of-flight mass spectrometry. The sample preparation method using the combination of Yatalase and silica beads showed higher accuracy for the identification of Aspergillus spp. compared with Yatalase or silica beads alone. The Yatalase/silica beads method also resulted in significantly higher identification scores compared with the conventional method for the identification of Aspergillus fumigatus (n = 33). These findings indicate that our novel Yatalase/silica beads method provides more reliable identification of A. fumigatus than does the conventional method.
引用
收藏
页数:6
相关论文
共 50 条
  • [41] Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry using an inorganic particle matrix for small molecule analysis
    Kinumi, T
    Saisu, T
    Takayama, M
    Niwa, H
    JOURNAL OF MASS SPECTROMETRY, 2000, 35 (03): : 417 - 422
  • [42] Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    Santos, C.
    Paterson, R. R. M.
    Venancio, A.
    Lima, N.
    JOURNAL OF APPLIED MICROBIOLOGY, 2010, 108 (02) : 375 - 385
  • [43] Rapid discrimination of Legionella by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    Fujinami, Yoshihito
    Kikkawa, Hitomi S.
    Kurosaki, Yohei
    Sakurada, Koichi
    Yoshino, Mineo
    Yasuda, Jiro
    MICROBIOLOGICAL RESEARCH, 2011, 166 (02) : 77 - 86
  • [44] USE OF MATRIX-ASSISTED LASER DESORPTION/IONIZATION TIME-OF-FLIGHT MASS SPECTROMETRY FOR MULTIPLEX GENOTYPING
    Meyer, Klaus
    Ueland, Per Magne
    ADVANCES IN CLINICAL CHEMISTRY, VOL 53, 2011, 53 : 1 - 29
  • [45] Identification of Weissella species by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    Lee, Meng-Rui
    Tsai, Chia-Jung
    Teng, Shih-Hua
    Hsueh, Po-Ren
    FRONTIERS IN MICROBIOLOGY, 2015, 6
  • [46] Evaluation of VITEK matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of anaerobes
    Xiao, Zheng
    Luo, Yanping
    Ye, Liyan
    Wang, Rui
    Zhang, Ying
    Zhao, Qiang
    Guo, Ling
    Ma, Yanning
    Cui, Shenghui
    MICROBIOLOGY AND IMMUNOLOGY, 2016, 60 (07) : 477 - 482
  • [47] Few Layer Graphene Matrix for Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
    Cho, Donghyun
    Hong, Sangsu
    Shim, Sangdeok
    JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY, 2013, 13 (08) : 5811 - 5813
  • [48] Evaluation of matrix-assisted laser desorption/ionization time of flight mass spectrometry for the identification of ceratopogonid and culicid larvae
    Steinmann, I. C.
    Pflueger, V.
    Schaffner, F.
    Mathis, A.
    Kaufmann, C.
    PARASITOLOGY, 2013, 140 (03) : 318 - 327
  • [49] Characterization of bacterial diversity in contaminated groundwater using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    Martin, Misty S.
    Santos, Ines C.
    Carlton, Doug D., Jr.
    Stigler-Granados, Paula
    Hildenbrand, Zacariah L.
    Schug, Kevin A.
    SCIENCE OF THE TOTAL ENVIRONMENT, 2018, 622 : 1562 - 1571
  • [50] Culture conditions and sample preparation methods affect spectrum quality and reproducibility during profiling of Staphylococcus aureus with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
    Goldstein, J. E.
    Zhang, L.
    Borror, C. M.
    Rago, J. V.
    Sandrin, T. R.
    LETTERS IN APPLIED MICROBIOLOGY, 2013, 57 (02) : 144 - 150