Evaluation of a novel sample preparation method for identifying Aspergillus fumigatus using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry: Combining Yatalase and silica beads treatment

被引:2
|
作者
Tsuchida, Sachio [1 ,2 ]
Yamashita, Koji [3 ,4 ]
Murata, Syota [3 ]
Miyabe, Akiko [3 ]
Satoh, Mamoru [2 ]
Matsushita, Kazuyuki [3 ]
Nakayama, Tomohiro [1 ]
Nomura, Fumio [2 ]
Umemura, Hiroshi [1 ,2 ,5 ]
机构
[1] Nihon Univ, Dept Pathol & Microbiol, Div Lab Med, Sch Med, 30-1 Oyaguchikamicho,Itabashi Ku, Tokyo 1738610, Japan
[2] Chiba Univ Hosp, Div Clin Mass Spectrometry, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[3] Chiba Univ Hosp, Dept Clin Lab, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[4] Chiba Univ, Med Mycol Res Ctr, Div Clin Res, 1-8-1 Inohana,Chuo Ku, Chiba 2608670, Japan
[5] Nihon Univ, Dept Pathol & Microbiol, Div Lab Med, Sch Med, 30-1 Oyaguchi Kamicho,Itabashi Ku, Tokyo 1738610, Japan
关键词
Matrix-assisted laser desorption ionization; time-of-flight mass spectrometry; Sample preparation; Aspergillus fumigatus; Yatalase; Silica beads; MALDI-TOF-MS; DESORPTION IONIZATION-TIME; IDENTIFICATION; DIAGNOSIS;
D O I
10.1016/j.mimet.2023.106706
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Aspergillus spp. belong to filamentous fungi and sometimes cause invasive aspergillosis which has high mortality. Filamentous fungi are generally identified morphologically. However, morphologic identification is time consuming and requires advanced skills. It is difficult to train technicians and ensure a high level of quality. Therefore, an identification technique that is both accurate and relatively easy to learn is needed. In the present study, we focused on the effects of Yatalase and silica beads, which enable the efficient extraction of proteins via cell wall disruption of Aspergillus spp., and aimed to establish a novel sample preparation method using Yatalase and silica beads to enhance the efficiency of Aspergillus spp. identification with matrix-assisted laser desorption/ ionization time-of-flight mass spectrometry. The sample preparation method using the combination of Yatalase and silica beads showed higher accuracy for the identification of Aspergillus spp. compared with Yatalase or silica beads alone. The Yatalase/silica beads method also resulted in significantly higher identification scores compared with the conventional method for the identification of Aspergillus fumigatus (n = 33). These findings indicate that our novel Yatalase/silica beads method provides more reliable identification of A. fumigatus than does the conventional method.
引用
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页数:6
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