Mutational Signatures in Gastric Cancer and Their Clinical Implications

被引:2
|
作者
Dominkus, Pia Puzar [1 ,2 ]
Hudler, Petra [2 ]
机构
[1] Univ Ljubljana, Inst Biochem & Mol Genet, Fac Med, Pharmacogenet Lab, Vrazov Trg 2, Ljubljana 1000, Slovenia
[2] Univ Ljubljana, Inst Biochem & Mol Genet, Fac Med, Med Ctr Mol Biol, Vrazov Trg 2, Ljubljana 1000, Slovenia
关键词
chromosomal instability; gastric cancer; genetic variability; gene expression; immune checkpoint inhibitors; microsatellite instability; mutational signatures; HELICOBACTER-PYLORI CAGA; DOUBLE-STRAND BREAKS; DNA-REPAIR; CELL-CYCLE; HOMOLOGOUS RECOMBINATION; SOMATIC MUTATIONS; P53; MUTATIONS; MECHANISMS; LANDSCAPE; CHEMOTHERAPY;
D O I
10.3390/cancers15153788
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Simple Summary There is a lack of molecular biomarkers that would allow better characterisation and categorisation of gastric tumours. Distinct mutational patterns have been observed at both the whole genome and exome levels and have been referred to as mutational signatures. Some of these characteristic mutational patterns have been associated with defects in DNA repair mechanisms or linked to exogenous mutagens. The mutational signatures found in gastric tumours could be used as prognostic biomarkers and could provide new information about the drivers of gastric carcinogenesis, which might be useful for the improvement in disease treatment options. This review summarises mutational signatures found in gastric cancer and their clinical potential. Gastric cancer is characterised by high inter- and intratumour heterogeneity. The majority of patients are older than 65 years and the global burden of this disease is increasing due to the aging of the population. The disease is usually diagnosed at advanced stages, which is a consequence of nonspecific symptoms. Few improvements have been made at the level of noninvasive molecular diagnosis of sporadic gastric cancer, and therefore the mortality rate remains high. A new field of mutational signatures has emerged in the past decade with advances in the genome sequencing technology. These distinct mutational patterns in the genome, caused by exogenous and endogenous mutational processes, can be associated with tumour aetiology and disease progression, and could provide novel perception on the treatment possibilities. This review assesses the mutational signatures found in gastric cancer and summarises their potential for use in clinical setting as diagnostic or prognostic biomarkers. Associated treatment options and biomarkers already implemented in clinical use are discussed, together with those that are still being explored or are in clinical studies.
引用
收藏
页数:24
相关论文
共 50 条
  • [21] Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples
    Marcos Díaz-Gay
    Maria Vila-Casadesús
    Sebastià Franch-Expósito
    Eva Hernández-Illán
    Juan José Lozano
    Sergi Castellví-Bel
    BMC Bioinformatics, 19
  • [22] Mutational Signatures in Cancer Laboratory Considerations and Emerging Applications
    Dong, Fei
    Davies, Kurtis D.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2023, 25 (11) : 790 - 795
  • [23] Divergence of mutational signatures in association with breast cancer subtype
    Perry, Gili
    Dadiani, Maya
    Kahana-Edwin, Smadar
    Pavlovski, Anya
    Markus, Barak
    Hornung, Gil
    Balint-Lahat, Nora
    Yosepovich, Ady
    Hout-Siloni, Goni
    Jacob-Hirsch, Jasmine
    Sklair-Levy, Miri
    Friedman, Eitan
    Barshack, Iris
    Kaufman, Bella
    Gal-Yam, Einav Nili
    Paluch-Shimon, Shani
    MOLECULAR CARCINOGENESIS, 2022, 61 (11) : 1056 - 1070
  • [24] Prognostic Implications of Novel Gene Signatures in Gastric Cancer Microenvironment
    Sun, Mengyu
    Qiu, Jieping
    Zhai, Huazheng
    Wang, Yaoqun
    Ma, Panpan
    Li, Mengying
    Chen, Bo
    MEDICAL SCIENCE MONITOR, 2020, 26
  • [25] Integrated analysis of the immunological and genetic status in and across cancer types: impact of mutational signatures beyond tumor mutational burden
    Budczies, Jan
    Seidel, Anja
    Christopoulos, Petros
    Endris, Volker
    Kloor, Matthias
    Gyorffy, Balazs
    Seliger, Barbara
    Schirmacher, Peter
    Stenzinger, Albrecht
    Denkert, Carsten
    ONCOIMMUNOLOGY, 2018, 7 (12):
  • [26] A Compendium of Mutational Signatures of Environmental Agents
    Kucab, Jill E.
    Zou, Xueqing
    Morganella, Sandro
    Joel, Madeleine
    Nanda, A. Scott
    Nagy, Eszter
    Gomez, Celine
    Degasperi, Andrea
    Harris, Rebecca
    Jackson, Stephen P.
    Arlt, Volker M.
    Phillips, David H.
    Nik-Zainal, Serena
    CELL, 2019, 177 (04) : 821 - +
  • [27] Signatures of mutational processes in human cancer
    Alexandrov, Ludmil B.
    Nik-Zainal, Serena
    Wedge, David C.
    Aparicio, Samuel A. J. R.
    Behjati, Sam
    Biankin, Andrew V.
    Bignell, Graham R.
    Bolli, Niccolo
    Borg, Ake
    Borresen-Dale, Anne-Lise
    Boyault, Sandrine
    Burkhardt, Birgit
    Butler, Adam P.
    Caldas, Carlos
    Davies, Helen R.
    Desmedt, Christine
    Eils, Roland
    Eyfjord, Jorunn Erla
    Foekens, John A.
    Greaves, Mel
    Hosoda, Fumie
    Hutter, Barbara
    Ilicic, Tomislav
    Imbeaud, Sandrine
    Imielinsk, Marcin
    Jaeger, Natalie
    Jones, David T. W.
    Jones, David
    Knappskog, Stian
    Kool, Marcel
    Lakhani, Sunil R.
    Lopez-Otin, Carlos
    Martin, Sancha
    Munshi, Nikhil C.
    Nakamura, Hiromi
    Northcott, Paul A.
    Pajic, Marina
    Papaemmanuil, Elli
    Paradiso, Angelo
    Pearson, John V.
    Puente, Xose S.
    Raine, Keiran
    Ramakrishna, Manasa
    Richardson, Andrea L.
    Richter, Julia
    Rosenstiel, Philip
    Schlesner, Matthias
    Schumacher, Ton N.
    Span, Paul N.
    Teague, Jon W.
    NATURE, 2013, 500 (7463) : 415 - +
  • [28] Mutational spectra and mutational signatures: Insights into cancer aetiology and mechanisms of DNA damage and repair
    Phillips, David H.
    DNA REPAIR, 2018, 71 : 6 - 11
  • [29] Topography of mutational signatures in human cancer
    Otlu, Burcak
    Diaz-Gay, Marcos
    Vermes, Ian
    Bergstrom, Erik N.
    Zhivagui, Maria
    Barnes, Mark
    Alexandrov, Ludmil B.
    CELL REPORTS, 2023, 42 (08):
  • [30] The repertoire of mutational signatures in human cancer
    Alexandrov, Ludmil B.
    Kim, Jaegil
    Haradhvala, Nicholas J.
    Huang, Mi Ni
    Ng, Alvin Wei Tian
    Wu, Yang
    Boot, Arnoud
    Covington, Kyle R.
    Gordenin, Dmitry A.
    Bergstrom, Erik N.
    Islam, S. M. Ashiqul
    Lopez-Bigas, Nuria
    Klimczak, Leszek J.
    McPherson, John R.
    Morganella, Sandro
    Sabarinathan, Radhakrishnan
    Wheeler, David A.
    Mustonen, Ville
    Getz, Gad
    Rozen, Steven G.
    Stratton, Michael R.
    NATURE, 2020, 578 (7793) : 94 - +