A living biobank of matched pairs of patient-derived xenografts and organoids for cancer pharmacology

被引：13

作者：

Xu, Xiaoxi ^{[1
]}

Kumari, Rajendra ^{[2
]}

Zhou, Jun ^{[3
]}

Chen, Jing ^{[2
]}

Mao, Binchen ^{[3
]}

Wang, Jingjing ^{[3
]}

Zheng, Meiling ^{[1
]}

Tu, Xiaolong ^{[3
]}

An, Xiaoyu ^{[2
]}

Chen, Xiaobo ^{[1
]}

Zhang, Likun ^{[1
]}

Tian, Xiaoli ^{[4
]}

Wang, Haojie ^{[5
]}

Dong, Xin ^{[5
]}

Bao, Zhengzheng ^{[1
]}

Guo, Sheng ^{[3
]}

Ouyang, Xuesong ^{[3
]}

Shang, Limei ^{[1
]}

Wang, Fei ^{[3
]}

Yan, Xuefei ^{[3
]}

Zhang, Rui ^{[3
]}

Vries, Robert G. J. ^{[6
,7
,8
]}

Clevers, Hans ^{[7
,8
]}

Li, Qi-Xiang ^{[2
]}

机构：

[1] Crown Biosci Inc, Beijing, Peoples R China

[2] Crown Biosci Inc, San Diego, CA 92127 USA

[3] Crown Biosci Inc, Taicang City, Jiangsu, Peoples R China

[4] Shanghai Yihao Biol Technol, Shanghai, Peoples R China

[5] Suzhou NeoL Biosci Co LTD, Suzhou, Peoples R China

[6] Hubrecht Organoid Technol HUB, Utrecht, Netherlands

[7] Royal Netherlands Acad Arts & Sci, Oncode Inst, Hubrecht Inst, Utrecht, Netherlands

[8] Univ Med Ctr, Utrecht, Netherlands

来源：

PLOS ONE | 2023年 / 18卷 / 01期

关键词：

TUMOR XENOGRAFTS; LUNG-CANCER; MODELS; CELLS; RESISTANCE; MUTATIONS; CETUXIMAB; PREDICT;

D O I：

10.1371/journal.pone.0279821

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Patient-derived tumor xenograft (PDX)/organoid (PDO), driven by cancer stem cells (CSC), are considered the most predictive models for translational oncology. Large PDX collections reflective of patient populations have been created and used extensively to test various investigational therapies, including population-trials as surrogate subjects in vivo. PDOs are recognized as in vitro surrogates for patients amenable for high-throughput screening (HTS). We have built a biobank of carcinoma PDX-derived organoids (PDXOs) by converting an existing PDX library and confirmed high degree of similarities between PDXOs and parental PDXs in genomics, histopathology and pharmacology, suggesting "biological equivalence or interchangeability" between the two. Here we demonstrate the applications of PDXO biobank for HTS "matrix" screening for both lead compounds and indications, immune cell co-cultures for immune-therapies and engineering enables in vitro/in vivo imaging. This large biobank of >550 matched pairs of PDXs/PDXOs across different cancers could become powerful tools for the future cancer drug discovery.

引用

页数：21

共 62 条

[1] Organoids in immunological research [J].

Bar-Ephraim, Yotam E. ;

Kretzschmar, Kai ;

Clevers, Hans .

NATURE REVIEWS IMMUNOLOGY, 2020, 20 (05) :279-293

[2] The toxicity of poisons applied jointly [J].

Bliss, CI .

ANNALS OF APPLIED BIOLOGY, 1939, 26 (03) :585-615

[3] Organoid Models of Human and Mouse Ductal Pancreatic Cancer [J].

Boj, Sylvia F. ;

Hwang, Chang-Il ;

Baker, Lindsey A. ;

Chio, Iok In Christine ;

Engle, Dannielle D. ;

Corbo, Vincenzo ;

Jager, Myrthe ;

Ponz-Sarvise, Mariano ;

Tiriac, Herve ;

Spector, Mona S. ;

Gracanin, Ana ;

Oni, Tobiloba ;

Yu, Kenneth H. ;

van Boxtel, Ruben ;

Huch, Meritxell ;

Rivera, Keith D. ;

Wilson, John P. ;

Feigin, Michael E. ;

Oehlund, Daniel ;

Handly-Santana, Abram ;

Ardito-Abraham, Christine M. ;

Ludwig, Michael ;

Elyada, Ela ;

Alagesan, Brinda ;

Biffi, Giulia ;

Yordanov, Georgi N. ;

Delcuze, Bethany ;

Creighton, Brianna ;

Wright, Kevin ;

Park, Youngkyu ;

Morsink, Folkert H. M. ;

Molenaar, I. Quintus ;

Rinkes, Inne H. Borel ;

Cuppen, Edwin ;

Hao, Yuan ;

Jin, Ying ;

Nijman, Isaac J. ;

Iacobuzio-Donahue, Christine ;

Leach, Steven D. ;

Pappin, Darryl J. ;

Hammell, Molly ;

Klimstra, David S. ;

Basturk, Olca ;

Hruban, Ralph H. ;

Offerhaus, George Johan ;

Vries, Robert G. J. ;

Clevers, Hans ;

Tuveson, David A. .

CELL, 2015, 160 (1-2) :324-338

[4] An organoid biobank for childhood kidney cancers that captures disease and tissue heterogeneity [J].

Calandrini, Camilla ;

Schutgens, Frans ;

Oka, Rurika ;

Margaritis, Thanasis ;

Candelli, Tito ;

Mathijsen, Luka ;

Ammerlaan, Carola ;

van Ineveld, Ravian L. ;

Derakhshan, Sepide ;

de Haan, Sanne ;

Dolman, Emmy ;

Lijnzaad, Philip ;

Custers, Lars ;

Begthel, Harry ;

Kerstens, Hindrik H. D. ;

Visser, Lindy L. ;

Rookmaaker, Maarten ;

Verhaar, Marianne ;

Tytgat, Godelieve A. M. ;

Kemmeren, Patrick ;

de Krijger, Ronald R. ;

Al-Saadi, Reem ;

Pritchard-Jones, Kathy ;

Kool, Marcel ;

Rios, Anne C. ;

van den Heuvel-Eibrink, Marry M. ;

Molenaar, Jan J. ;

van Boxtel, Ruben ;

Holstege, Frank C. P. ;

Clevers, Hans ;

Drost, Jarno .

NATURE COMMUNICATIONS, 2020, 11 (01)

[5] A set of defined oncogenic mutation alleles seems to better predict the response to cetuximab in CRC patient-derived xenograft than KRAS 12/13 mutations [J].

Chen, Dawei ;

Huang, Xuesong ;

Cai, Jie ;

Guo, Sheng ;

Qian, Wubin ;

Wery, Jean-Pierre ;

Li, Qi-Xiang .

ONCOTARGET, 2015, 6 (38) :40815-40821

[6]

Chen DXA, TARGET IDENTIFICATIO, V1953

[7] Authentication, characterization and contamination detection of cell lines, xenografts and organoids by barcode deep NGS sequencing [J].

Chen, Xiaobo ;

Qian, Wubin ;

Song, Zhenzhen ;

Li, Qi-Xiang ;

Guo, Sheng .

NAR GENOMICS AND BIOINFORMATICS, 2020, 2 (03)

[8] Dose Escalation Trial of the Wee1 Inhibitor Adavosertib (AZD1775) in Combination With Gemcitabine and Radiation for Patients With Locally Advanced Pancreatic Cancer [J].

Cuneo, Kyle C. ;

Morgan, Meredith A. ;

Sahai, Vaibhav ;

Schipper, Matthew J. ;

Parsels, Leslie A. ;

Parsels, Joshua D. ;

Devasia, Theresa ;

Al-Hawaray, Mahmoud ;

Cho, Clifford S. ;

Nathan, Hari ;

Maybaum, Jonathan ;

Zalupski, Mark M. ;

Lawrence, Theodore S. .

JOURNAL OF CLINICAL ONCOLOGY, 2019, 37 (29) :2643-+

[9] Wee1 Kinase Inhibitor AZD1775 Radiosensitizes Hepatocellular Carcinoma Regardless of TP53 Mutational Status Through Induction of Replication Stress [J].

Cuneo, Kyle C. ;

Morgan, Meredith A. ;

Davis, Mary A. ;

Parcels, Leslie A. ;

Parcels, Joshua ;

Karnak, David ;

Ryan, Caila ;

Liu, Na ;

Maybaum, Jonathan ;

Lawrence, Theodore S. .

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2016, 95 (02) :782-790

[10] Modeling Breast Cancer Using CRISPR-Cas9-Mediated Engineering of Human Breast Organoids [J].

Dekkers, Johanna F. ;

Whittle, James R. ;

Vaillant, Francois ;

Chen, Huei-Rong ;

Dawson, Caleb ;

Liu, Kevin ;

Geurts, Maarten H. ;

Herold, Marco J. ;

Clevers, Hans ;

Lindeman, Geoffrey J. ;

Visvader, Jane E. .

JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2020, 112 (05) :540-544

← 1 2 3 4 5 6 7 →