Fungal Diversity and Dynamics during Long-Term Immersion of Conventional and Biodegradable Plastics in the Marine Environment

被引:10
作者
Philippe, Aurelie [1 ]
Noel, Cyril [2 ]
Eyheraguibel, Boris [3 ]
Briand, Jean-Francois [4 ]
Paul-Pont, Ika [5 ]
Ghiglione, Jean-Francois [6 ]
Coton, Emmanuel [1 ]
Burgaud, Gaetan [1 ]
机构
[1] Lab Univ Biodivers & Ecol Microbienne, Univ Brest, INRAE, F-29280 Plouzane, France
[2] Ifremer, SeBiMER Serv Bioinformat Ifremer, IRSI, F-29280 Plouzane, France
[3] Univ Clermont Auvergne, Inst Chim Clermont Ferrand ICCF, CNRS, UMR 6296, Clermont Ferrand, France
[4] Univ Toulon & Var, Lab Materiaux Polymeres Interfaces Environm Marin, EA 4323, Toulon, France
[5] Univ Brest, Ifremer, CNRS, IRD,LEMAR, F-29280 Plouzane, France
[6] Sorbonne Univ, CNRS, Lab Oceanog Microbienne LOMIC, UMR 7621,Observ Oceanol Banyuls, Banyuls Sur mer, France
来源
DIVERSITY-BASEL | 2023年 / 15卷 / 04期
关键词
plastisphere; marine fungi; diversity; colonization dynamics; biodegradable vs; conventional plastics; COMMUNITIES; MICROPLASTICS; COLONIZATION; POLYETHYLENE; BACTERIAL; PRIMERS;
D O I
10.3390/d15040579
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
Plastics are associated with a worldwide pollution crisis, with strong negative impacts on both terrestrial and aquatic ecosystems. In marine environments, various organisms are colonizing plastic debris, but few studies have focused on fungal communities despite their non-trivial ecological roles in the marine environment. In this study, different types of plastics (biodegradable and conventional) immersed in marine natural environments and under laboratory controlled settings were collected after long-term colonization. Using a metabarcoding approach targeting two genetic markers, namely, the ITS2 region and the V4 hypervariable region of the 18S rRNA gene, we highlighted that fungal communities associated with plastic polymers were distinct from those found in the surrounding seawater. They also differed significantly between sampling locations and the nature of immersed polymers, indicating that fungal colonization was impacted by the sites and types of plastics, with clear dissimilarities between conventional and biodegradable polymers. Specifically for the conventional PVC polymer (Polyvinyl chloride), we also observed the successive stages of biofilm development and maturation after long-term immersion in seawater. A noticeable change in the fungal communities was observed around 30-40 days in natural settings, suggesting a colonization dynamic likely associated with a transition from biofilm formation to distinct communities likely associated with biofouling. Overall, this study strengthens the idea that the fungal kingdom is an integrated part of the "plastisphere".
引用
收藏
页数:23
相关论文
共 93 条
  • [1] ALVAREZ-ZEFERINO J.C., 2015, Open Journal of Polymer Chemistry, V5, P55, DOI [10.4236/ojpchem.2015.54007, DOI 10.4236/OJPCHEM.2015.54007]
  • [2] Diversity and predicted inter- and intra-domain interactions in the Mediterranean Plastisphere*
    Amaral-Zettler, Linda A.
    Ballerini, Tosca
    Zettler, Erik R.
    Asbun, Alejandro Abdala
    Adame, Alvaro
    Casotti, Raffaella
    Dumontet, Bruno
    Donnarumma, Vincenzo
    Engelmann, Julia C.
    Frere, Laura
    Mansui, Jeremy
    Philippon, Marion
    Pietrelli, Loris
    Sighicelli, Maria
    [J]. ENVIRONMENTAL POLLUTION, 2021, 286
  • [3] [Anonymous], 2021, From Pollution to Solution: a global assessment of marine litter and plastic pollution
  • [4] [Anonymous], 2020, Plastics-the facts 2020. An Analysis of European Plastics Production
  • [5] Plastics and microplastics in the oceans: From emerging pollutants to emerged threat
    Avio, Carlo Giacomo
    Gorbi, Stefania
    Regoli, Francesco
    [J]. MARINE ENVIRONMENTAL RESEARCH, 2017, 128 : 2 - 11
  • [6] Soil Microbial Communities Associated With Biodegradable Plastic Mulch Films
    Bandopadhyay, Sreejata
    Gonzalez, Jose E. Liquet y
    Henderson, Kelsey B.
    Anunciado, Marife B.
    Hayes, Douglas G.
    DeBruyn, Jennifer M.
    [J]. FRONTIERS IN MICROBIOLOGY, 2020, 11
  • [7] Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris
    Basili, Marco
    Quero, Grazia Marina
    Giovannelli, Donato
    Manini, Elena
    Vignaroli, Carla
    Avio, Carlo Giacomo
    De Marco, Rocco
    Luna, Gian Marco
    [J]. FRONTIERS IN MARINE SCIENCE, 2020, 7
  • [8] Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
    Bolyen, Evan
    Rideout, Jai Ram
    Dillon, Matthew R.
    Bokulich, NicholasA.
    Abnet, Christian C.
    Al-Ghalith, Gabriel A.
    Alexander, Harriet
    Alm, Eric J.
    Arumugam, Manimozhiyan
    Asnicar, Francesco
    Bai, Yang
    Bisanz, Jordan E.
    Bittinger, Kyle
    Brejnrod, Asker
    Brislawn, Colin J.
    Brown, C. Titus
    Callahan, Benjamin J.
    Caraballo-Rodriguez, Andres Mauricio
    Chase, John
    Cope, Emily K.
    Da Silva, Ricardo
    Diener, Christian
    Dorrestein, Pieter C.
    Douglas, Gavin M.
    Durall, Daniel M.
    Duvallet, Claire
    Edwardson, Christian F.
    Ernst, Madeleine
    Estaki, Mehrbod
    Fouquier, Jennifer
    Gauglitz, Julia M.
    Gibbons, Sean M.
    Gibson, Deanna L.
    Gonzalez, Antonio
    Gorlick, Kestrel
    Guo, Jiarong
    Hillmann, Benjamin
    Holmes, Susan
    Holste, Hannes
    Huttenhower, Curtis
    Huttley, Gavin A.
    Janssen, Stefan
    Jarmusch, Alan K.
    Jiang, Lingjing
    Kaehler, Benjamin D.
    Bin Kang, Kyo
    Keefe, Christopher R.
    Keim, Paul
    Kelley, Scott T.
    Knights, Dan
    [J]. NATURE BIOTECHNOLOGY, 2019, 37 (08) : 852 - 857
  • [9] PCR primers that amplify fungal rRNA genes from environmental samples
    Borneman, J
    Hartin, RJ
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (10) : 4356 - 4360
  • [10] Diversity and Activity of Communities Inhabiting Plastic Debris in the North Pacific Gyre
    Bryant, Jessica A.
    Clemente, Tara M.
    Viviani, Donn A.
    Fong, Allison A.
    Thomas, Kimberley A.
    Kemp, Paul
    Karl, David M.
    White, Angelicque E.
    DeLong, Edward F.
    [J]. MSYSTEMS, 2016, 1 (03)