Time to relapse in chronic lymphocytic leukemia and DNA-methylation-based biological age

被引:4
|
作者
Nannini, Drew R. R. [1 ]
Cortese, Rene [2 ,3 ,4 ]
Egwom, Peter [1 ]
Palaniyandi, Senthilnathan [3 ,4 ,5 ]
Hildebrandt, Gerhard C. [3 ,4 ,5 ]
机构
[1] Univ Missouri Columbia, Sch Med, Dept Internal Med, MA408 Med Sci Bldg, Columbia, MO 65212 USA
[2] Univ Missouri Columbia, Sch Med, Dept Child Hlth, Columbia, MO 65212 USA
[3] Univ Missouri Columbia, Sch Med, Dept Obstet Gynecol & Womens Hlth, Columbia, MO 65212 USA
[4] Univ Missouri Columbia, Ellis Fischel Canc Ctr, Columbia, MO 65212 USA
[5] Univ Missouri Columbia, Sch Med, Div Hematol & Med Oncol, Columbia, MO 65212 USA
关键词
Epigenetic age acceleration; Aging; Chronic lymphocytic leukemia; Chemotherapy; Treatment response; CLINICAL-SIGNIFICANCE; SURVIVAL; METAANALYSIS; EXPRESSION; PROFILES; MUTATION; DECADE;
D O I
10.1186/s13148-023-01496-8
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Chronic lymphocytic leukemia (CLL) is a mature B cell neoplasm with a predilection for older individuals. While previous studies have identified epigenetic signatures associated with CLL, whether age-related DNA methylation changes modulate CLL relapse remains elusive. In this study, we examined the association between epigenetic age acceleration and time to CLL relapse in a publicly available dataset. DNA methylation profiling of 35 CLL patients prior to initiating chemoimmunotherapy was performed using the Infinium HumanMethylation450 BeadChip. Four epigenetic age acceleration metrics (intrinsic epigenetic age acceleration [IEAA], extrinsic epigenetic age acceleration [EEAA], PhenoAge acceleration [PhenoAA], and GrimAge acceleration [GrimAA]) were estimated from blood DNA methylation levels. Linear, quantile, and logistic regression and receiver operating characteristic curve analyses were conducted to assess the association between each epigenetic age metric and time to CLL relapse. EEAA (p = 0.011) and PhenoAA (p = 0.046) were negatively and GrimAA (p = 0.040) was positively associated with time to CLL relapse. Simultaneous assessment of EEAA and GrimAA in male patients distinguished patients who relapsed early from patients who relapsed later (p = 0.039). No associations were observed with IEAA. These findings suggest epigenetic age acceleration prior to chemoimmunotherapy initiation is associated with time to CLL relapse. Our results provide novel insight into the association between age-related DNA methylation changes and CLL relapse and may serve has biomarkers for treatment relapse, and potentially, treatment selection.
引用
收藏
页数:8
相关论文
共 50 条
  • [41] DNA-methylation-based telomere length estimator: comparisons with measurements from flow FISH and qPCR
    Pearce, Emily E.
    Horvath, Steve
    Katta, Shilpa
    Dagnall, Casey
    Aubert, Geraldine
    Hicks, Belynda D.
    Spellman, Stephen R.
    Katki, Hormuzd
    Savage, Sharon A.
    Alsaggaf, Rotana
    Gadalla, Shahinaz M.
    AGING-US, 2021, 13 (11): : 14675 - 14686
  • [42] Clinical significance of DNA methylation in chronic lymphocytic leukemia patients: results from 3 UK clinical trials
    Wojdacz, Tomasz K.
    Amarasinghe, Harindra E.
    Kadalayil, Latha
    Beattie, Alice
    Forster, Jade
    Blakemore, Stuart J.
    Parker, Helen
    Bryant, Dean
    Larrayoz, Marta
    Clifford, Ruth
    Robbe, Pauline
    Davis, Zadie A.
    Else, Monica
    Howard, Dena R.
    Stamatopoulos, Basile
    Steele, Andrew J.
    Rosenquist, Richard
    Collins, Andrew
    Pettitt, Andrew R.
    Hillmen, Peter
    Plass, Christoph
    Schuh, Anna
    Catovsky, Daniel
    Oscier, David G.
    Rose-Zerilli, Matthew J. J.
    Oakes, Christopher C.
    Strefford, Jonathan C.
    BLOOD ADVANCES, 2019, 3 (16) : 2474 - 2481
  • [43] Multivariable Model for Time to First Treatment in Patients With Chronic Lymphocytic Leukemia
    Wierda, William G.
    O'Brien, Susan
    Wang, Xuemei
    Faderl, Stefan
    Ferrajoli, Alessandra
    Do, Kim-Anh
    Garcia-Manero, Guillermo
    Cortes, Jorge
    Thomas, Deborah
    Koller, Charles A.
    Burger, Jan A.
    Lerner, Susan
    Schlette, Ellen
    Abruzzo, Lynne
    Kantarjian, Hagop M.
    Keating, Michael J.
    JOURNAL OF CLINICAL ONCOLOGY, 2011, 29 (31) : 4088 - 4095
  • [44] Evaluation of different computational methods for DNA methylation-based biological age
    Di Lena, Pietro
    Sala, Claudia
    Nardini, Christine
    BRIEFINGS IN BIOINFORMATICS, 2022, 23 (04)
  • [45] Time to Treatment Prediction in Chronic Lymphocytic Leukemia Based on New Transcriptional Patterns
    Mosquera Orgueira, Adrian
    Antelo Rodriguez, Beatriz
    Alonso Vence, Natalia
    Bendana Lopez, Angeles
    Diaz Arias, Jose Angel
    Diaz Varela, Nicolas
    Gonzalez Perez, Marta Sonia
    Perez Encinas, Manuel Mateo
    Bello Lopez, Jose Luis
    FRONTIERS IN ONCOLOGY, 2019, 9
  • [46] Exploiting biological diversity and genomic aberrations in chronic lymphocytic leukemia
    Seiffert, Martina
    Dietrich, Sascha
    Jethwa, Alexander
    Glimm, Hanno
    Lichter, Peter
    Zenz, Thorsten
    LEUKEMIA & LYMPHOMA, 2012, 53 (06) : 1023 - 1031
  • [47] Epigenetic deregulation in chronic lymphocytic leukemia: Clinical and biological impact
    Mansouri, Larry
    Wierzbinska, Justyna Anna
    Plass, Christoph
    Rosenquist, Richard
    SEMINARS IN CANCER BIOLOGY, 2018, 51 : 1 - 11
  • [48] Comprehensive DNA Methylation Analysis Using a Methyl-CpG-binding Domain Capture-based Method in Chronic Lymphocytic Leukemia Patients
    Subhash, Santhilal
    Kanduri, Meena
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2017, (124):
  • [49] The long noncoding RNA, treRNA, decreases DNA damage and is associated with poor response to chemotherapy in chronic lymphocytic leukemia
    Miller, Cecelia R.
    Ruppert, Amy S.
    Fobare, Sydney
    Chen, Timothy L.
    Liu, Chaomei
    Lehman, Amy
    Blachly, James S.
    Zhang, Xiaoli
    Lucas, David M.
    Grever, Michael R.
    Tallman, Martin S.
    Flinn, Ian W.
    Rassenti, Laura Z.
    Kipps, Thomas J.
    Sampath, Deepa
    Coombes, Kevin R.
    Hertlein, Erin K.
    ONCOTARGET, 2017, 8 (16) : 25942 - 25954
  • [50] Deciphering the molecular landscape in chronic lymphocytic leukemia: time frame of disease evolution
    Sutton, Lesley-Ann
    Rosenquist, Richard
    HAEMATOLOGICA, 2015, 100 (01) : 7 - 16