Lysine Malonylation and Its Links to Metabolism and Diseases

被引:29
作者
Zou, Lu [1 ]
Yang, Yanyan [2 ]
Wang, Zhibin [3 ]
Fu, Xiuxiu [3 ]
He, Xiangqin [3 ]
Song, Jiayi [1 ]
Li, Tianxiang [1 ]
Ma, Huibo [4 ]
Yu, Tao [1 ,3 ]
机构
[1] Qingdao Univ, Affiliated Hosp, Inst Translat Med, Qingdao, Peoples R China
[2] Qingdao Univ, Basic Med Sch, Dept Immunol, Qingdao, Peoples R China
[3] Qingdao Univ, Affiliated Hosp, Dept Cardiac Ultrasound, Qingdao, Peoples R China
[4] Qingdao Univ, Affiliated Hosp, Dept Vasc Surg, Qingdao, Peoples R China
基金
中国国家自然科学基金;
关键词
malonylation; metabolism; angiogenesis; fatty acids oxidation; cardiomyopathy; COA DECARBOXYLASE INHIBITION; COENZYME-A DECARBOXYLASE; FATTY-ACID OXIDATION; CARDIAC GLUCOSE-OXIDATION; POSTTRANSLATIONAL MODIFICATIONS; GENE-EXPRESSION; ISCHEMIC-HEART; ANGIOGENESIS; SUCCINYLATION; CARBOXYLASE;
D O I
10.14336/AD.2022.0711
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
Malonylation is a recently identified post-translational modification with malonyl-coenzyme A as the donor. It conserved both in prokaryotes and eukaryotes. Recent advances in the identification and quantification of lysine malonylation by bioinformatic analysis have improved our understanding of its role in the regulation of protein activity, interaction, and localization and have elucidated its involvement in many biological processes. Malonylation has been linked to diverse physiological processes, including metabolic disorders, inflammation, and immune regulation. This review discusses malonylation in theory, describes the underlying mechanism, and summarizes the recent progress in malonylation research. The latest findings point to novel functions of malonylation and highlight the mechanisms by which malonylation regulates a variety of cellular processes. Our review also marks the association between lysine malonylation, the enzymes involved, and various diseases, and discusses promising diagnostic and therapeutic biomolecular targets for future clinical applications.
引用
收藏
页码:84 / 98
页数:15
相关论文
共 50 条
[21]   iLMS, Computational Identification of Lysine-Malonylation Sites by Combining Multiple Sequence Features [J].
Hasan, Md Mehedi ;
Kurata, Hiroyuki .
PROCEEDINGS 2018 IEEE 18TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING (BIBE), 2018, :356-359
[22]   Analysis and review of techniques and tools based on machine learning and deep learning for prediction of lysine malonylation sites in protein sequences [J].
Ramazi, Shahin ;
Tabatabaei, Seyed Amir Hossein ;
Khalili, Elham ;
Nia, Amirhossein Golshan ;
Motarjem, Kiomars .
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2024, 2024
[23]   Histone acylations and chromatin dynamics: concepts, challenges, and links to metabolism [J].
Nitsch, Sandra ;
Zorro Shahidian, Lara ;
Schneider, Robert .
EMBO REPORTS, 2021, 22 (07)
[24]   Proteomic and Biochemical Studies of Lysine Malonylation Suggest Its Malonic Aciduria-associated Regulatory Role in Mitochondrial Function and Fatty Acid Oxidation [J].
Colak, Gozde ;
Pougovkina, Olga ;
Dai, Lunzhi ;
Tan, Minjia ;
te Brinke, Heleen ;
Huang, He ;
Cheng, Zhongyi ;
Park, Jeongsoon ;
Wan, Xuelian ;
Liu, Xiaojing ;
Yue, Wyatt W. ;
Wanders, Ronald J. A. ;
Locasale, Jason W. ;
Lombard, David B. ;
de Boer, Vincent C. J. ;
Zhao, Yingming .
MOLECULAR & CELLULAR PROTEOMICS, 2015, 14 (11) :3056-3071
[25]   Global profiling of protein lysine malonylation in Toxoplasma gondii strains of different virulence and genetic backgrounds [J].
Nie, Lan-Bi ;
Liang, Qin-Li ;
Wang, Meng ;
Du, Rui ;
Zhang, Meng-Yuan ;
Elsheikha, Hany M. ;
Zhu, Xing-Quan .
PLOS NEGLECTED TROPICAL DISEASES, 2022, 16 (05)
[26]   Succinylation Links Metabolism to Protein Functions [J].
Yang, Yun ;
Gibson, Gary E. .
NEUROCHEMICAL RESEARCH, 2019, 44 (10) :2346-2359
[27]   LYSINE METABOLISM IN MAN [J].
VIANEYLIAUD, C ;
DIVRY, P ;
POINAS, C ;
MATHIEU, M .
ANNALES DE BIOLOGIE CLINIQUE, 1991, 49 (01) :18-26
[28]   Global Profiling of Lysine Acetylation in Borrelia burgdorferi B31 Reveals Its Role in Central Metabolism [J].
Bontemps-Gallo, Sebastien ;
Gaviard, Charlotte ;
Richards, Crystal L. ;
Kentache, Takfarinas ;
Raffel, Sandra J. ;
Lawrence, Kevin A. ;
Schindler, Joseph C. ;
Lovelace, Joseph ;
Dulebohn, Daniel P. ;
Cluss, Robert G. ;
Hardouin, Julie ;
Gherardini, Frank C. .
FRONTIERS IN MICROBIOLOGY, 2018, 9
[29]   Computational analysis and prediction of lysine malonylation sites by exploiting informative features in an integrative machine-learning framework [J].
Zhang, Yanju ;
Xie, Ruopeng ;
Wang, Jiawei ;
Leier, Andre ;
Marquez-Lago, Tatiana T. ;
Akutsu, Tatsuya ;
Webb, Geoffrey, I ;
Chou, Kuo-Chen ;
Song, Jiangning .
BRIEFINGS IN BIOINFORMATICS, 2019, 20 (06) :2185-2199
[30]   Global Proteome Analysis Links Lysine Acetylation to Diverse Functions in Oryza Sativa [J].
Xue, Chao ;
Liu, Shuai ;
Chen, Chen ;
Zhu, Jun ;
Yang, Xibin ;
Zhou, Yong ;
Guo, Rui ;
Liu, Xiaoyu ;
Gong, Zhiyun .
PROTEOMICS, 2018, 18 (01)