Genomic characterization of bloqvIM-11-harbouring plasmids recovered from Pseudomonas aeruginosa
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作者:
Elena, Alan
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Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
CONICET Consejo Nacl Invest Cient & Tecn, Buenos Aires, Argentina
Tech Univ Dresden, Inst Hydrobiol, Dresden, GermanyUniv Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
Elena, Alan
[1
,2
,3
]
Cejas, Daniela
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机构:
Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
CONICET Consejo Nacl Invest Cient & Tecn, Buenos Aires, Argentina
Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Junin 954, RA-C1113AAD Buenos Aires, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
Cejas, Daniela
[1
,2
,4
]
Gutkind, Gabriel
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Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
CONICET Consejo Nacl Invest Cient & Tecn, Buenos Aires, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
Gutkind, Gabriel
[1
,2
]
Radice, Marcela
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机构:
Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
CONICET Consejo Nacl Invest Cient & Tecn, Buenos Aires, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
Radice, Marcela
[1
,2
]
机构:
[1] Univ Buenos Aires, Fac Farm & Bioquim, Inst Invest Bacteriol & Virol Mol IBaViM, Buenos Aires, Argentina
[2] CONICET Consejo Nacl Invest Cient & Tecn, Buenos Aires, Argentina
Objectives. To the best of our knowledge, no genomic descriptions of blayim-11-harbouring plasmids are available in literature so far. The aim of this study was to describe the genomic features of three blayim-11- harbouring plasmids recovered from Pseudomonas aeruginosa isolated in Argentina in different periods. Methods: blavim-11-harbouring plasmids from three clinical P. aeruginosa isolates were transferred by transformation into P. aeruginosa PAO-1. Then, genomic DNA of these transformants was extracted and sequenced using NovaSeq 6000 System-Illumina. De novo assemblies were generated using Unicycler pro- gram and reads were mapped against a reference genome of P. aeruginosa PAO-1. Plasmids sequences were predicted identifying the reads that did not map the reference sequence of PAO-1. These reads were recovered and assembled de novo. In silico predictions were carried out using bioinformatics tools. Results: One Plasmid (pP6VIM-11) was distributed in 2 contigs, a second plasmid (pPOta2VIM-11) was found in single contig, and the last one (pP936401VIM-11) was fragmented into 4 contigs. pP6VIM- 11 and pFOta2VIM-11 belonged to the IncP-18 group, displaying 64% of coverage and 83.9% of identity among them. pP936401VIM-1 plasmid corresponded to the IncN group. The bioinformatic analysis re- vealed that blayim-11 was located in a class 1 integron, flanked by insertion sequences, exhibiting potential for its dissemination. However, none of the plasmids were conjugative. Conclusion This study corresponded to the first description and deposit of blayim-11-harbouring plasmids in P. aeruginosa, which expands the limited knowledge about their molecular epidemiology. (c) 2023 The Author(s). Published by Elsevier Ltd on behalf of International Society for Antimicrobial Chemotherapy. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Elena, Alan
Quinteros, Mirta
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Hosp Infecciosas Dr Francisco Javier Muniz, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Quinteros, Mirta
Di Conza, Jose
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h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Di Conza, Jose
Gutkind, Gabriel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Gutkind, Gabriel
Cejas, Daniela
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Cejas, Daniela
Radice, Marcela A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Radice, Marcela A.
[J].
REVISTA ARGENTINA DE MICROBIOLOGIA,
2020,
52
(04):
: 298
-
304
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Elena, Alan
Quinteros, Mirta
论文数: 0引用数: 0
h-index: 0
机构:
Hosp Infecciosas Dr Francisco Javier Muniz, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Quinteros, Mirta
Di Conza, Jose
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Di Conza, Jose
Gutkind, Gabriel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Gutkind, Gabriel
Cejas, Daniela
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Cejas, Daniela
Radice, Marcela A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Consejo Nacl Invest Cient & Tecnol CONICET, Buenos Aires, DF, ArgentinaUniv Buenos Aires, Fac Farm & Bioquim, Dept Microbiol Inmunol Biotecnol & Genet, Catedra Microbiol, Buenos Aires, DF, Argentina
Radice, Marcela A.
[J].
REVISTA ARGENTINA DE MICROBIOLOGIA,
2020,
52
(04):
: 298
-
304