Analysis of the prognostic significance and potential mechanisms of lncRNAs related to m6A methylation in laryngeal cancer

被引:0
作者
Cen, Jingtu [1 ]
Wang, Lihua [1 ]
Zhang, Haopeng [1 ]
Guo, Yu [1 ,2 ]
机构
[1] Shanghai Univ Tradit Chinese Med, Shanghai Municipal Hosp Tradit Chinese Med, Ear nose throat Dept, Shanghai, Peoples R China
[2] Shanghai Univ Tradit Chinese Med, Shanghai Municipal Hosp Tradit Chinese Med, Ear nose throat Dept, Shanghai 200040, Peoples R China
关键词
m6a; laryngeal cancer; lncRNAs; Prognostic biomarker; SMS; RNA;
D O I
10.1080/02648725.2023.2198630
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Objective to investigate the prognostic significance and potential mechanism analysis of m6A methylation-associated lncRNAs in laryngeal cancer. Methods based on the expression of m6A-associated lncRNAs, the samples were divided into two clusters and least absolute value and selection operator (LASSO) regression analysis was performed to build and validate prognostic models. In addition, the relationships between risk scores, clusters, arginine synthase (SMS), tumor microenvironment, clinicopathological features, immune infiltration, immune checkpoints, and tumor mutation burden were analyzed. Finally, the relationship between SMS and m6A-associated IncRNAs was analyzed and SMS-associated pathways were enriched by gene set enrichment analysis (GSEA). Results a total of 95 lncRNAs were associated with the expression of 22 m6A methylation regulators in laryngeal cancer, 14 of which were prognostic lncRNAs. These lncRNAs were divided into two clusters and evaluated. Clinicopathological features did not show significant differences. However, the two clusters differed significantly in terms of naive B cells, memory B cells, naive CD4 T cells, T helper cells and immune score. lASSO regression analysis showed that risk score was a significant predictor of progression-free survival. Conclusion low expression of m6A-related lncRNAs involved in laryngeal cancer development in laryngeal cancer tissues can be used as an indicator to diagnose patients with laryngeal cancer, reduce patient prognosis, be an independent risk factor affecting patient prognosis and be able to assess patient prognosis.
引用
收藏
页码:2129 / 2154
页数:26
相关论文
共 50 条
  • [1] Analysis of the prognostic significance and potential mechanisms of lncRNAs associated with m6A methylation in papillary thyroid carcinoma
    Huang, Yinde
    Li, Xin
    Chen, Wenbin
    He, Yuzhen
    Wu, Song
    Li, Xinyang
    Hou, Bingchen
    Wang, Shiyue
    He, Yuchen
    Jiang, Han
    Lun, Yu
    Zhang, Jian
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2021, 101
  • [2] Comprehensive analysis of lncRNAs modified by m6A methylation in sheep skin
    Meng, Jinzhu
    Li, Jianping
    Zhao, Yuanyuan
    ANIMAL BIOSCIENCE, 2024, 37 (11) : 1887 - 1900
  • [3] Comprehensive analysis of m6A modification patterns and m6A-related lncRNAs as potential biomarkers in lung adenocarcinoma
    Wang, Sheng
    Gu, Xuyu
    Xu, Duo
    Liu, Bo
    Qin, Kai
    Yuan, Xianglin
    ENVIRONMENTAL TOXICOLOGY, 2024, 39 (04) : 2285 - 2303
  • [4] Analysis of m6A-related lncRNAs for prognostic and immunotherapeutic response in hepatocellular carcinoma
    Wu, Xingwei
    Wang, Shengnan
    Wu, Xiaoming
    Chen, Qianyi
    Cheng, Jin
    Qi, Zhilin
    JOURNAL OF CANCER, 2024, 15 (07): : 2045 - 2065
  • [5] Exploring m6A methylation in skin Cancer: Insights into molecular mechanisms and treatment
    Cai, Mingjun
    Li, Xueqing
    Luan, Xueyu
    Zhao, Pengyuan
    Sun, Qing
    CELLULAR SIGNALLING, 2024, 124
  • [6] Identification and Validation of a Prognostic Prediction Model of m6A Regulator-Related LncRNAs in Hepatocellular Carcinoma
    Jin, Chen
    Li, Rui
    Deng, Tuo
    Li, Jialiang
    Yang, Yan
    Li, Haoqi
    Chen, Kaiyu
    Xiong, Huihua
    Chen, Gang
    Wang, Yi
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [7] N6-Methylandenosine-Related lncRNAs in Tumor Microenvironment Are Potential Prognostic Biomarkers in Colon Cancer
    Zhang, Hongliang
    Zhao, Lei
    Li, Songyan
    Wang, Jing
    Feng, Cong
    Li, Tanshi
    Du, Xiaohui
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [8] The prognostic value and immune landscaps of m6A/m5C-related lncRNAs signature in the low grade glioma
    Li, Ran
    Chen, Haiyan
    Li, Chaoxi
    Qi, Yiwei
    Zhao, Kai
    Wang, Junwen
    You, Chao
    Huang, Haohao
    BMC BIOINFORMATICS, 2023, 24 (01)
  • [9] Microarray analysis of genes with differential expression of m6A methylation in lung cancer
    Wu, Shuo
    Lv, Xing
    Zhang, Yan
    Xu, Xi
    Zhao, Feng
    Zhang, Yao
    Chen, Lizhan
    Ou-Yang, Haifeng
    Ti, Xinyu
    BIOSCIENCE REPORTS, 2021, 41 (09)
  • [10] Investigating the prognostic value of m6A methylation-related genes in renal cell carcinoma patients
    Ge, G. -c.
    Wang, C. -h.
    EUROPEAN REVIEW FOR MEDICAL AND PHARMACOLOGICAL SCIENCES, 2023, 27 (24) : 11932 - 11946